Detailed information on CNT3040152


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 3e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Marchantia polymorphaJuglans regia30.9620.1781.97305forward
CNT30630954Marchantia polymorphaVigna unguiculata30.9652.8682.95305forward
CNT3085816Marchantia polymorphaVigna radiata30.9647.8181.64305forward

Expression of CNT3040152

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGPFPVTIAWTKNPNMENMASLPFFSSLTFSSAKFRGSNEPPG*

>peptide 2 (86 aa)
MASHLLASSKCLISQLKDFRLVSGGEGGGVGPGVVGNGVSQVVGQVLDGTLSGNDSLDEESEHGEHGEPSVLQLLDLQLSEVQGVE*

>peptide 3 (33 aa)
AFFFISSFCLMALDTQLSTSQWSEKFGCFIGGS*

>peptide 4 (43 aa)
MGSTTSPKGPPATLYPSMAPMSTTWQAQMARMLWAWTRLELPR*

>peptide 5 (90 aa)
IFLYFQFLFDGARHTTEYFSMVRKIWLLYRRVVDFSLPHPGYIRLRSECKTQELNLSNRVVSDTSIQVGHFFVQNEIDLLEKANHRSYSR*

>peptide 6 (29 aa)
MAHRAWITSNSRFLAKVSGSAESPAVSHP*

Sequence

>CNT3040152
GCATTTTTCTTTATTTCCAGTTTTTGTTTGATGGCGCTCGACACACAACTGAGTACTTCTCAATGGTCCGAAAAATTTGGCTGCTTTATAGGCGGGTCGT
AGATTTTTCACTCCCGCATCCCGGTTATATTCGACTCAGATCCGAATGCAAAACCCAGGAACTCAATCTCAGCAATCGCGTTGTCTCTGATACCAGCATA
CAAGTAGGCCACTTTTTTGTACAAAATGAGATAGATTTATTAGAGAAGGCGAATCACAGGAGCTACTCCAGGTAGCGATTGGCAGCTTTGAAGTAACCTA
CGAAGCAACTATATACACCTGGTGCCGACGGACTTTTGAGTTCCATGGCAAGCCATCTCCTCGCCAGCTCCAAATGCCTAATCTCACAGCTGAAGGATTT
TCGTCTAGTTTCCGGGGGTGAAGGTGGTGGCGTAGGCCCAGGCGTTGTTGGCAACGGGGTCAGCCAAGTGGTCGGACAGGTTCTCGATGGGACCCTTTCC
GGTAACGATAGCCTGGACGAAGAATCCGAACATGGAGAACATGGCGAGCCTTCCGTTCTTCAGCTCCTTGACCTTCAGCTCAGCGAAGTTCAGGGGGTCG
AATGAGCCTCCGGGGTAGATGGGGTCGACGACATCACCCAAAGGACCTCCTGCTACTCTGTATCCCTCGATGGCTCCCATGAGCACAACCTGGCAAGCCC
AGATGGCCAGAATGCTCTGGGCGTGGACGAGGCTCGAGTTACCGAGGTAGTCCAAACCTCCCTCAGCGAAGATCTGTGATCCAGCCTTGAACCACACTGC
CTCTCCGAACTTCACACCGTTCTTGGCCAACAACTCGGGGAAGACGCATCCCAGAGCTCCCAACATGGCCCATCGAGCGTGGATCACCTCCAATTCACGG
TTCTTGGCGAAGGTCTCGGGGTCAGCAGAGAGTCCTGCAGTGTCCCATCCGTAGTCACCGGGGAACTCACCAGTCAGGTACGAGG