Detailed information on CNT30628558


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 5e-172

BLAST vs NONCODE:
NONPOPT000587, E-value = 5e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30266730Vigna unguiculataChenopodium quinoa24.8218.5785.1208forward
CNT30729048Vigna unguiculataCorchorus capsularis35.5645.4384.56298forward
CNT30524850Vigna unguiculataPhaseolus vulgaris85.9299.7295.42720forward
CNT30490001Vigna unguiculataOlea europaea29.4749.883247forward
CNT30508528Vigna unguiculataSolanum lycopersicum26.6142.9783.86223forward
CNT30620812Vigna unguiculataCajanus cajan38.4225.9384.16322forward
CNT30113329Vigna unguiculataFicus carica23.7518.4885.93199forward

Expression of CNT30628558

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MAQGHRWHKKLGQCTFSQVHLPQHSLQPASQYRHHCGQPWWGPCPKRHHCGQPWWGPCPKRHHHHEHPSHRKYQ*

>peptide 2 (67 aa)
MMIFLPVRPASPWGPPITNRPEGLRWKMVFSSRYFSGMTGLITCSLRSAAIWSLLTVSLCWVEIRTV*

>peptide 3 (73 aa)
MSTPATVSINDDLSSSETSITMGATNHKPARRVKVEDGLLIKVLLRNDRLDNMLFKVSSNLVIAHSFIVLGGN*

Sequence

>CNT30628558
ATTAAATTCTTCACCACACGCCTATGCCTGAGGCTTCTCTGACTTGAGTGGCTTCACAACTTCCCATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCA
TAAGCAGCTGTCTTCAAGAACCTGTGGCCACCCCTCTTCAGGTCCAAGTTAATGGTGATCATTCCAGGTCTGAAGTCGAAATTCTCCTTCACAATCTGAA
GAATCTCCTTGTCGGGAATCTTTCCGGTTCCATAGGTATCAACAAAGACTGACAATGGCTCAGGGACACCGATGGCATAAGAAACTTGGACAATGCACCT
TCTCGCAAGTCCATTTGCCACAACACTCTTTGCAGCCTGCCTCACAATATAGGCACCACTGCGGTCAACCTTGGTGGGGTCCTTGCCCGAAAAGGCACCA
CTGCGGTCAACCTTGGTGGGGTCCTTGCCCGAAAAGGCACCACCACCATGAGCACCCCAGCCACCGTAAGTATCAATGATGATCTTTCTTCCAGTGAGAC
CAGCATCACCATGGGGGCCACCAATCACAAACCGGCCCGAAGGGTTAAGGTGGAAGATGGTCTTCTCATCAAGGTACTTCTCCGGAATGACAGGCTTGAT
AACATGCTCTTTAAGGTCAGCAGCAATTTGGTCATTGCTCACAGTTTCATTGTGTTGGGTGGAAATTAGAACGGTGTGAACACGGACTGGAACCATGGCA
CCGTTGTCATTGTAGTACTCAACAGTCACTTGGGTTTTACCATCTGGCCTCAACCATCCACAGGTACCATTCTTCCTAACCTCGGTTAGGCGAGCACCGA
GTTTGGTGGCAAGGACATGGCTGAGCGGCATGTATTCA