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Detailed information on CNT30524850


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 6e-148

BLAST vs NONCODE:
NONPOPT000585, E-value = 1e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Phaseolus vulgarisSetaria viridis32.5530.3287.23235forward
CNT30520816Phaseolus vulgarisSetaria italica46.2638.6683.53334forward
CNT30515028Phaseolus vulgarisJuglans regia34.7629.5682.87251forward
CNT30373104Phaseolus vulgarisArabidopsis thaliana46.8140.2984.32338forward
CNT30618114Phaseolus vulgarisSesamum indicum29.7847.5781.86215forward
CNT30266730Phaseolus vulgarisChenopodium quinoa28.6718.4884.06207forward
CNT3021108Phaseolus vulgarisCitrullus lanatus50.4222.1184.62364forward
CNT30381460Phaseolus vulgarisManihot esculenta46.436.4585.37335forward
CNT30402638Phaseolus vulgarisBeta vulgaris50.1428.2686.19362forward
CNT30628558Phaseolus vulgarisVigna unguiculata99.7285.9295.42720forward
CNT30194995Phaseolus vulgarisPisum sativum26.3219.9683.16190forward
CNT3090332Phaseolus vulgarisSolanum tuberosum36.8440.9284.59266forward
CNT30294498Phaseolus vulgarisTriticum aestivum30.0627.1683.87217forward
CNT30225924Phaseolus vulgarisHordeum vulgare30.0638.5483.41217forward
CNT30389985Phaseolus vulgarisTriticum turgidum42.9430.4883.87310forward
CNT30146819Phaseolus vulgarisMedicago truncatula50.6948.7486.34366forward
CNT30437887Phaseolus vulgarisAegilops tauschii26.3227.1484.21190forward
CNT30471290Phaseolus vulgarisSaccharum spontaneum32.5526.1787.66235forward
CNT30681758Phaseolus vulgarisTriticum urartu30.0631.8283.87217forward
CNT30349162Phaseolus vulgarisEragrostis tef46.2636.6683.53334forward
CNT30368062Phaseolus vulgarisSorghum bicolor25.0716.4786.74181forward
CNT3035650Phaseolus vulgarisCucumis melo50.422784.34364forward
CNT30174546Phaseolus vulgarisVigna angularis25.3523.9286.34183forward
CNT30725315Phaseolus vulgarisLupinus angustifolius49.7235.6986.07359forward

Expression of CNT30524850

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MMIFLPVRPASPWGPPITNRPDGLRWKMVFSSRYFSGMTGLITCSLRSAAIWSLLTVSSCWVEIRTV*

>peptide 2 (73 aa)
MSTPATVGINDDLSSSETSITMGATNHEPTRWVKVEDGLLIKVLLGNDWLDNMLFKVSSNLVIAHSLIMLGGN*

Sequence

>CNT30524850
CTCTGACTTGAGTGGCTTCACCACTTCCCATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCATAAGCAGCTGTCTTCAGGAACCTGTGGCCACCCCTC
TTGAGGTCCAAGTTAATGGTGATCATTCCAGGTCTGAAGTCGAAATTCTCCTTCACAATCTGAAGAATCTCCTTATCAGGAATCTTTCCGGTTCCATAGG
TGTCAACAAAGACTGACAAGGGCTCAGGGACACCGATGGCATAAGAAACTTGGACAATGCACCTTCTGGCAAACCCATTTGCCACAACGCTCTTTGCAGC
CTGCCTCACAATATAGGCACCACTTCTGTCAACCTTGGTTGGGTCCTTGCCTGAAAAGGCACCACTTCTGTCAACCTTGGTTGGGTCCTTGCCTGAAAAG
GCACCACCACCATGAGCACCCCAGCCACCGTAGGTATCAATGATGATCTTTCTTCCAGTGAGACCAGCATCACCATGGGGGCCACCAATCACGAACCGAC
CCGATGGGTTAAGGTGGAAGATGGTCTTCTCATCAAGGTACTTCTCGGGAATGACTGGCTTGATAACATGCTCTTTAAGGTCAGCAGCAATTTGGTCATT
GCTCACAGTCTCATCATGTTGGGTGGAAATTAGAACAGTGTGAACACGGATTGGAACCATGGCACCGTTGTCATTGTTGTACTCAACAGTTACTTGTGTT
TTACCATCTGGCCTCAACCAAG