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Detailed information on CNT30490001


BLAST search results

BLAST vs Swiss-Prot:
sp|P31156|METK2_PETCR, E-value = 9e-56

BLAST vs NONCODE:
NONTPRT001916, E-value = 1e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520870Olea europaeaSetaria italica26.4119.2683.97131forward
CNT30641080Olea europaeaNymphaea colorata46.3725.780.87230forward
CNT30549537Olea europaeaIpomoea triloba52.4239.0486.15260forward
CNT30372626Olea europaeaArabidopsis thaliana49.438.2281.63245forward
CNT30266729Olea europaeaChenopodium quinoa23.999.2384.03119forward
CNT30729048Olea europaeaCorchorus capsularis36.0927.2986.59179forward
CNT30381460Olea europaeaManihot esculenta21.9811.8688.07109forward
CNT30402686Olea europaeaBeta vulgaris39.9232.8481.82198forward
CNT30524774Olea europaeaPhaseolus vulgaris49.834.0784.21247forward
CNT30628558Olea europaeaVigna unguiculata49.829.4783247forward
CNT30712486Olea europaeaGlycine max49.830.8483.4247forward
CNT3047443Olea europaeaPrunus dulcis52.6221.8887.36261forward
CNT30638840Olea europaeaCapsicum annuum51.8130.0983.27257forward
CNT30225701Olea europaeaHordeum vulgare22.1821.6181.82110forward
CNT30389985Olea europaeaTriticum turgidum22.7811.1184.96113forward
CNT30508528Olea europaeaSolanum lycopersicum39.5237.7683.67196forward
CNT30146819Olea europaeaMedicago truncatula46.3730.6381.74230forward
CNT30437887Olea europaeaAegilops tauschii22.7816.1484.96113forward
CNT30667060Olea europaeaTriticum dicoccoides23.9918.7481.51119forward
CNT3059692Olea europaeaArabidopsis lyrata17.9430.884.2789forward
CNT30606743Olea europaeaGossypium raimondii49.623.0384.96246forward
CNT30218668Olea europaeaKalanchoe fedtschenkoi48.7962.5382.23242forward
CNT3066706Olea europaeaLeersia perrieri25.236.7684125forward
CNT30626924Olea europaeaDaucus carota51.2120.1481.5254forward
CNT30477100Olea europaeaArabidopsis halleri16.3320.5183.9581forward
CNT30620812Olea europaeaCajanus cajan51.8120.6985.99257forward
CNT30570674Olea europaeaVitis vinifera52.8227.7588.17262forward
CNT3024331Olea europaeaPopulus trichocarpa51.8124.6485.21257forward
CNT30496713Olea europaeaDigitaria exilis23.997.984.03119forward
CNT30551132Olea europaeaOryza brachyantha16.7321.589.1683forward
CNT30725315Olea europaeaLupinus angustifolius49.424.3585.31245forward

Expression of CNT30490001

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPISSSFQEPVIATPLKIQVYGYHTRPEIEALLHNLENFLVRDLSSTICVYKN*

>peptide 2 (45 aa)
MDIIPGLKSKLSFTILRISLSGIFPVPYVSTKTDKGSGTPMAYETC

Sequence

>CNT30490001
GGATTTCTTTTATAAATCTTATATATCAAACGATGAAGAGAGCTGACACAGCTTAATCTGTATTCACCTTTACTTCAGTTACACCAAAAAGAAACATTAT
TCTTTAATTGAAAAAAAAAAAAAACACTAAAGTATAGTCGAGCAAACATAAGCCGGTGGCAAGATTTCTGGAGAGTTAAACGACAGGCAGCACGCCTCAG
TTTATGAGATGGATAACCGTTAATTAAGCTCGACTCTTGTCCCACTTGAGAGGCTTGATCACTTCCCATGTGAAATCAGGGTCATCTCTGCCAAAATGCC
CATAAGCAGCAGTTTTCAAGAACCTGTGATTGCCACCCCTCTTAAGATCCAGGTTTATGGATATCATACCAGGCCTGAAATCGAAGCTCTCCTTCACAAT
CTTGAGAATTTCCTTGTCAGGGATCTTTCCAGTACCATATGTGTCTACAAAAACTGACAAGGGCTCAGGTACCCCAATGGCATACGAAACCTGCAC