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Detailed information on CNT30628474


BLAST search results

BLAST vs Swiss-Prot:
sp|P27991|PAL1_SOYBN, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517474Vigna unguiculataJuglans regia17.832084.17120forward
CNT30710196Vigna unguiculataGlycine max35.8133.8583.82241forward
CNT30636696Vigna unguiculataCapsicum annuum34.6218.5884.55233forward
CNT3096482Vigna unguiculataSolanum tuberosum87.6793.2180.34590forward
CNT30189069Vigna unguiculataSecale cereale13.8221.5384.9593forward
CNT30562324Vigna unguiculataActinidia chinensis30.6198.180.58206forward
CNT30460506Vigna unguiculataSaccharum spontaneum10.730.1386.1172forward
CNT30592821Vigna unguiculataEragrostis curvula14.5645.7985.7198forward

Expression of CNT30628474

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MELLSILHVGTSIQNVLHDGSSLNLTRVVL*

>peptide 2 (41 aa)
LPPCNALFLETSISGLSFTELISLSIDLVEKRMTSMRGPSH*

>peptide 3 (47 aa)
MADRTSDNTASIFASKRTIEAKPEPTAVPLTRARPSLGCNSKNSELM*

>peptide 4 (31 aa)
MELLSILHVGTSIQNVLHDGSSLNLTRVVKF*

Sequence

>CNT30628474
AATTACCACCATGCAATGCCTTGTTCCTTGAAACATCAATAAGTGGGTTGTCATTCACAGAGTTAATCTCTCTCTCGATTGACTTGGTGGAGAAACGGAT
GACTTCAATGAGAGGACCAAGCCACTGAGGTGAAGTTCTGAGGGCATATCTATCTTGTTTTGGCTTTTGCAAAGGATCAATTTCATGGAGCTTCTTAGCA
TCCTTCATGTAGGAACTTCCATCCAAAATGTGCTCCATGATGGCAGCAGCCTCAATTTGACCAGGGTGGTGAAGTTCTGAGGGCATATCTATCTTGTTTT
GGCTTTTGCAAAGGATCAATTTCATGGAGCTTCTTAGCATCCTTCATGTAGGAACTTCCATCCAAAATGTGCTCCATGATGGCAGCAGCCTCAATTTGAC
CAGGGTGGTGCTTTAACTTGTGTGTCAAATGATCAGTGAACTCGGGCTTTCCTTGCATCACTTCGGCAAAAATGGCTGATAGAACTTCAGACAACACAGC
CAGTATATTTGCCTCAAAGAGAACTATTGAAGCCAAGCCAGAACCCACAGCTGTGCCATTAACAAGGGCAAGGCCTTCCTTGGGCTGCAATTCAAAGAAC
TCAGAATTGATGTGAGCCGATTCAAAAGCTTGCTTGGCATTAAGTACTTCCCCAGAAGGTCCAACAGCTTTGG