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Detailed information on CNT30592821


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DZE0|PAL2_ORYSJ, E-value = 2e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517474Eragrostis curvulaJuglans regia31.7811.3388.2468forward
CNT3069045Eragrostis curvulaQuercus suber33.1816.3285.9271forward
CNT30628474Eragrostis curvulaVigna unguiculata45.7914.5685.7198forward
CNT30636617Eragrostis curvulaCapsicum annuum508.2285.05107forward
CNT3092362Eragrostis curvulaSolanum tuberosum35.51486.8476forward
CNT30189069Eragrostis curvulaSecale cereale48.624.0785.58104forward
CNT30568715Eragrostis curvulaActinidia chinensis28.512.586.8961forward
CNT30510944Eragrostis curvulaSolanum lycopersicum35.5115.3886.8476forward
CNT30244654Eragrostis curvulaAvena sativa88.328.5887.83189forward
CNT3082373Eragrostis curvulaBrassica juncea63.089.1682.22135forward
CNT30460506Eragrostis curvulaSaccharum spontaneum50.4745.1990.74108forward
CNT30345244Eragrostis curvulaEragrostis tef43.9337.7588.394forward
CNT30573527Eragrostis curvulaVitis vinifera31.784.4586.7668forward
CNT30107267Eragrostis curvulaOryza longistaminata50.4743.990.74108forward
CNT3023983Eragrostis curvulaPopulus trichocarpa43.468.9987.193forward
CNT3038180Eragrostis curvulaCucumis melo34.586.7486.4974forward
CNT30329354Eragrostis curvulaDioscorea rotundata47.211.4386.14101forward
CNT3040161Eragrostis curvulaMarchantia polymorpha61.219.182.44131forward

Expression of CNT30592821

Peptides detected in this lncRNA

>peptide 1 (69 aa)
RVVLQLVGQWVELAHLLSKLHVGAAFQDVLHDSGSLNLPWVVLQFVGQVVGVLRLAVHDLAEHRGQDFGK

>peptide 2 (42 aa)
MCSMIAAASICPGWCFNLWVRWSVYSGLPFMTSQNTADRTSAR

Sequence

>CNT30592821
CCCGGGTGGTGCTTCAGCTTGTGGGTCAGTGGGTCGAGCTCGCCCATCTTCTTAGCAAGCTTCATGTAGGAGCTGCCTTCCAAGATGTGCTCCATGATAG
CGGCAGCCTCAATCTGCCCTGGGTGGTGCTTCAATTTGTGGGTCAGGTGGTCGGTGTACTCCGGCTTGCCGTTCATGACCTCGCAGAACACCGCGGACAG
GACTTCGGCAAGGA