Detailed information on CNT30636696


BLAST search results

BLAST vs Swiss-Prot:
sp|P25872|PAL1_TOBAC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT002995, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628474Capsicum annuumVigna unguiculata18.5834.6284.55233forward
CNT30710196Capsicum annuumGlycine max12.7622.4783.12160forward
CNT3075415Capsicum annuumBrassica juncea22.0129.3380.07276forward

Expression of CNT30636696

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MLDSNRTIDAIPEPTAVPFTRASPSFGCN

>peptide 2 (44 aa)
MKFTVSAHCQSSLSYLADCVLDCILQVFFQVPQVYSLAKSHEIG*

>peptide 3 (37 aa)
MSTASAVFLDEIKPKELTSWLCCSALWTWLVTGFAKN*

>peptide 4 (48 aa)
IEGLPLSRVILALSTSLGNTAFNSSSKAAIFWKIELFTFFSLSPLFSA*

>peptide 5 (46 aa)
METPIGVPWKFPPCKALFLETSINGLSFTELISLSIILVAARMTSI*

>peptide 6 (70 aa)
MELLSCLDIRAAIQNVIHFMELLSCLDIRAAIQNVFHNSSSLNLTRVMLQLVCQMVSEFGLSIHHFSENR*

>peptide 7 (51 aa)
MVSHWICQELKFRAVRSHRDFSSLETIVQAWIPSCCEIRWQTIVVIVVDKF*

Sequence

>CNT30636696
ATTGAAGGGTTGCCACTTTCAAGAGTAATTCTTGCACTCTCAACTTCTTTAGGCAATACGGCCTTCAATTCGTCCTCGAAAGCTGCAATCTTTTGGAAGA
TTGAGCTGTTCACATTCTTCTCGCTTTCACCGTTGTTCAGTGCATGATCAACGAGGACTTGTCTCAGCTTCTGCATCAAAGGGTAGGTTGAGCTGCAGGG
ATCATCAGCATAGGCAAACAAGTATTCCCTGTCCACGACTCGAAGCAACTCCTTTTCGCAGAATCTTGCTGGATGAAGTTCACCGTTAGCGCCCATTGTC
AAAGTTCTCTTAGCTACTTGGCTGACTGTGTTCTTGACTGCATTCTTCAAGTTTTCTTCCAAGTGCCTCAAGTCTATAGCTTGGCAAAGAGCCACGAGAT
AGGTTGATGACATCAGCTTCAAGATGTCAACCGCCTCGGCTGTTTTCCTTGATGAGATTAAGCCCAAGGAGTTAACATCTTGGTTGTGTTGCTCGGCACT
TTGGACATGGTTAGTCACTGGATTTGCCAAGAATTGAAGTTCCGAGCAGTAAGAAGCCATCGCGATTTCAGCTCCCTTGAAACCATAGTCCAAGCTTGGA
TTCCTTCCTGCTGTGAGATTAGATGGCAAACCATTGTTGTAATAGTCGTTGACAAGTTCTGAGAACTGAGCAAACATCAATTTCCCAATTGATGCAAGGG
CCAATCTTGTGTTATCCATGGAGACACCAATAGGGGTGCCTTGGAAATTCCCACCGTGTAAGGCCTTGTTTCTTGAAACATCGATCAATGGATTGTCGTT
CACTGAGTTGATCTCCCTCTCGATCATCTTAGTTGCAGCGCGAATGACTTCAATTTGAGGGCCTAGCCATTGTGGAGATGTTCGGAGAGCATAACGATCT
TGCTTTGGTTTCTGGAGAGGATCCATTTCATGGAGCTTTTGAGCTGCCTTGACATAAGAGCTGCCATCCAAAATGTGATCCATTTCATGGAGCTTTTGAG
CTGCCTTGACATAAGAGCTGCCATCCAAAATGTGTTCCATAATAGCAGCAGCCTCAATCTGACCAGGGTGATGCTTCAACTTGTGTGTCAGATGGTCAGT
GAATTCGGGCTTTCCATTCATCACTTCAGCGAAAATCGCTGACAAAACTTCAGACATAACAGCAAGAATGTTGGACTCAAACAGGACCATCGACGCCATA
CCAGAACCAACTGCTGTACCATTCACAAGGGCAAGTCCTTCCTTTGGCTGCAAC