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Detailed information on CNT30619939


BLAST search results

BLAST vs Swiss-Prot:
sp|B8ANF1|CHLH_ORYSI, E-value = 2e-156

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514102Cajanus cajanJuglans regia56.1853.0386.89473forward
CNT30727458Cajanus cajanCorchorus capsularis24.8232.487.56209forward
CNT30712554Cajanus cajanGlycine max33.4976.8495.74282forward
CNT30248818Cajanus cajanAvena sativa25.1831.3678.77212forward
CNT30426485Cajanus cajanPapaver somniferum46.0823.4479.38388forward
CNT3031792Cajanus cajanTheobroma cacao47.8610086.85403forward
CNT3036031Cajanus cajanCucumis melo3143.3684.67261forward
CNT30575876Cajanus cajanOryza barthii42.6456.5479.11359forward

Expression of CNT30619939

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKMSPNTPEQLTTTSILGLPSSSRLTGSTRFTLPKVSATGVTPIIHKT*

>peptide 2 (31 aa)
MNILACWQNFWISYWVTTRPRLHIFTLQGLF*

Sequence

>CNT30619939
CTACTAAATTGATCTCACCCTTCATTAATTGAAAATCAGCAAGAGAAGTGATACTTGATTGATGAAAATGTCTCCAAACACTCCTGAGCAATTAACAACG
ACATCAATCCTCGGCCTTCCAAGCTCTTCAAGACTTACAGGTTCCACCCGGTTTACCCTACCAAAGGTATCAGCCACTGGTGTCACACCAATCATCCACA
AGACTTGAGCCAGGGATTCACCATATGTTTTAATATTATCAGTTCCCCACAACACAAGTGCAATTGTCTCTGGATATTTCCCCCCATTCTCAGCTTTCTG
CCTCTCAATCAACCTTTCTACCACTATTTTGGCACTCTGCATTGCAGCAGTTGTAGGAATAGATTGTGGGTCCAGGGCATGAATATTCTTGCCTGTTGGC
AAAACTTTTGGATTTCTTATTGGGTCACCACCAGGCCCCGGCTCCACATATTTACCCTCCAAGGCTTGTTTTAAACTTCCCAACTCATTATCTGCCACAA
TTAACTTCAAACATTCTCCCAGGAACATAAACAAGGTTCTAAGTTTTTCCCTATCAGCTCTGTAAAATTTGGTGTTTGACAAGTATTGAATCCATGGCTC
ATTTATGCCAAATCCAAGGATTGCGCTAAGCTTGTCAGCTACATCAACAACTTGACCCTTATTATTGGTAGTGCGCTCTACAAAGGCAGTGACTGCTCCA
CGTGATGCCTCGGTTATTTGCCTGAGAAGTTCTACATCCTTCAATATTCCTTTGTCACTTCCTCTATACACATCTTCCATATCTCTTCCAACAGTGTCAG
CTAATATTGCTGGAAGAGAAGAAATGCCATCTTCAGGACGAT