« Back to Arabidopsis lyrata search


Detailed information on CNT3061823


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672831Arabidopsis lyrataSetaria viridis8.7821.5585.9464forward
CNT30515289Arabidopsis lyrataJuglans regia19.229.2380140forward
CNT30168984Arabidopsis lyrataPistacia vera19.8945.3181.38145forward
CNT30510806Arabidopsis lyrataSolanum lycopersicum8.9222.4987.6965forward
CNT30440568Arabidopsis lyrataAegilops tauschii12.0725.9682.9588forward
CNT30614007Arabidopsis lyrataArabis alpina38.4146.2885280forward
CNT3056582Arabidopsis lyrataAmborella trichopoda19.221.7182.14140forward
CNT30150813Arabidopsis lyrataBrachypodium distachyon20.326.0183.78148forward

Expression of CNT3061823

Sequence

>CNT3061823
TATGTTATGATCATCAAACATGATGTAGTTTTACTTTTTTTATCGTCTCTCATTTTTTGGTAGTTTAATCCCATTTCTTCGAAGCTTTGTGAAAAATTCA
ACACACTTATGTGAATCTGACATGTAAAGAAATTTTCATAAAGAGAGCTTTCTACCAAGTTTTTAAGAGAAAGGGTCACCAATGACCAACTAGTAGAGAG
AAAGTACTTAGATCAGAGAAAAAGTAGAACATAAAATCCAACACTAAATAGAGAGTTCAAATAAAAAAAACAATAACAAAGAGAACACTTAGTCGACTTC
CTCGATCTTGGGACCAGCCCCACCTGAGGCAGGAGGAGCATCATCTTCGTCCATTCCAGCAGCTCCAGGACCACCAGCTTCACCACCAGCTCCTCCTTGA
TACATCTTAGCGATGATCGGATTGCAAACACTCTCCAACTCCTTCATCTTGTCTTCAAACTCGTCAGCTTCAGCCAATTGGTTACCATCTAGCCATTGAA
TTGCTTCCTCAATCGAGTCCTCAACCTTCTTCTTGTCTGCCGCCGGAAGCTTCTCACCGATCTTCTCGTCACGGATTGTGCTCCATACACTTCCTAAAGA
GATCCATGTTCATCTCTTCGAATCTAGCACGGGTGATTGGAGAATAGAAGTCAGCTCCATCAAACAAAGAGTCAATCTCAATGGTCGTCTGCGCGGTGGA
AGAAAGAGTCCTCTTTGCTCTCTCACAAG