Detailed information on CNT30617683


BLAST search results

BLAST vs Swiss-Prot:
sp|P42027|NDUS7_BRAOL, E-value = 6e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377550Sesamum indicumArabidopsis thaliana13.5320.4487.556forward
CNT30273993Sesamum indicumChenopodium quinoa55.5644.9282.61230forward
CNT30166899Sesamum indicumPistacia vera40.3434.2983.83167forward
CNT30653852Sesamum indicumRosa chinensis5715.6887.29236forward
CNT30210007Sesamum indicumHelianthus annuus23.1912.585.4296reverse complement
CNT30363204Sesamum indicumSorghum bicolor24.1521.1485100forward
CNT3023971Sesamum indicumPopulus trichocarpa56.2855.4880.69233forward

Expression of CNT30617683

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LRRAGAILLVRVPATIMQSDCLGLGLKMIPNRSKS*

>peptide 2 (38 aa)
MGQMEPRRAQFIRSSTFEITYSAALDIPAGDEARAERW*

>peptide 3 (65 aa)
AESRSHLIGESSSNNHAIRLPGAGSENDSKPIQIVARGPGVHHLDSAAGQPKGHGPDGASASPVH*

Sequence

>CNT30617683
TTGCGGAGAGCAGGAGCCATCTTATTGGTGAGAGTTCCAGCAACAATCATGCAATCCGACTGCCTGGGGCTGGGTCTGAAAATGATTCCAAACCGATCCA
AATCGTAGCGCGCGGCCCCGGTGTGCATCATCTCGACAGCGCAGCAGGCCAGCCCAAAGGTCATGGGCCAGATGGAGCCTCGGCGAGCCCAGTTCATTAG
GTCATCGACCTTCGAGATCACATACTCCGCCGCCTTAGATATCCCGGCGGGCGACGAGGCGAGGGCGGAGCGGTGGTGATACGGCGTCGTCTGGGAGAGT
ACGCGTCCGGCGTTTCTGGCTAGCTGAGCCATTTTCCCTCTGTTCTATTTTTCTGGATCGCAAGAAGGCGGTGTTTATGCTGAAATGGGCGAGATGGGGA
GAAATGGGGCGAGG