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Detailed information on CNT30377550


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617683Arabidopsis thalianaSesamum indicum20.4413.5387.556forward
CNT30311073Arabidopsis thalianaCamelina sativa40.8829.1791.07112forward
CNT30653852Arabidopsis thalianaRosa chinensis20.443.7287.556forward

Expression of CNT30377550

Peptides detected in this lncRNA

>peptide 1 (39 aa)
QIDPVRAQFMRSSTLEITNSAALERPGGGGEVEGGPGLV*

>peptide 2 (43 aa)
PDRSGTSPVHEIIDLGDHKFGRFRETRRRRGGRRRTRSGVGSR*

Sequence

>CNT30377550
GCCAGATCGATCCGGTACGAGCCCAGTTCATGAGATCATCGACCTTGGAGATCACAAATTCGGCCGCTTTAGAGAGACCAGGAGGAGGAGGGGAGGTCGA
AGGAGGACCAGGTCTGGTGTAGGAAGTCGGTGATGTGGAGGGAGAGAGAGCGGGAAGGGATGTGTGGAGGAGAGGGAGGCGCGTGGCGGTGTTGCGCGTA
ATCATCGCCATTTAGATTTGTCTCTCTGAGTTTTTTTTTTCCTCTCGTCGTGGAGTTGTGATAACCAAACGAGT