Detailed information on CNT30166899


BLAST search results

BLAST vs Swiss-Prot:
sp|P42027|NDUS7_BRAOL, E-value = 5e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617683Pistacia veraSesamum indicum34.2940.3483.83167forward
CNT30653852Pistacia veraRosa chinensis33.0610.788.2161forward
CNT30570482Pistacia veraVitis vinifera17.6636.688.3786forward
CNT30112805Pistacia veraFicus carica34.2931.3989.22167forward

Expression of CNT30166899

Peptides detected in this lncRNA

>peptide 1 (66 aa)
LVGESASDDHTIGLSRAGPENDTETVQIITSGSCVHHLHGAAGEPEGHGPDRATAHIVDDVFGRLG*

>peptide 2 (29 aa)
ILLVRVPATIIQSDCRGLGLKMTPKRSRS*

>peptide 3 (34 aa)
MVDSVEKERGIRCLNRFEEAGSCSPLIKRLLGAL*

Sequence

>CNT30166899
ATCTTGTTGGTGAGAGTGCCAGCGACGATCATACAATCGGACTGTCGAGGGCTGGGCCTGAAAATGACACCGAAACGGTCCAGATCATAACGAGCGGCTC
CTGTGTGCATCATCTCCACGGCGCAGCAGGCGAGCCCGAAGGTCATGGGCCAGATAGAGCCACGGCGCACATAGTTGATGACGTATTCGGCCGTCTTGGA
TAAGGCAGGGGGCTGGGCAGAGGGCGAGGGCGAGAGAGGTGAAGGATGAGAGTACGAGGCGGGTGAGGGGGAAGGTGAAAGAGAGGGGAGAGTGGTGTGG
AGAGAAGCGGCGCGTTGAGAGAGGAGGTAAGGGAGGCGGGTGGCGGTGTTTCTGGAGATCATAGCCATGGTTGATTCTGTTGAGAAAGAGAGAGGAATTC
GGTGCCTGAACAGATTTGAGGAGGCGGGCAGTTGCTCTCCGTTAATAAAGAGACTGTTGGGAGCACTTTAATGCGAAGTCACTAATA