Detailed information on CNT30363204


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617683Sorghum bicolorSesamum indicum21.1424.1585100forward
CNT30653852Sorghum bicolorRosa chinensis24.317.6487.83115forward
CNT30112805Sorghum bicolorFicus carica28.9625.7586.86137forward

Expression of CNT30363204

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MGQIEPLRAQFIRSSTLETTNSAVFDIAGGGAPPYGAGDVEEAPAAAAAE*

>peptide 2 (63 aa)
MALGTSRRRPQQRRRSRPAEWRGGPAARCAGAAPWSVARVSSPRGGGRGSVGRFGGMASRSSGG

>peptide 3 (29 aa)
MLIKQPGHTSFQAQQICKSEQSLSLFQMR*

>peptide 4 (37 aa)
RRTDFKYRALCSSNNLDIHPSRHNKFANLSKVCPYFR*

Sequence

>CNT30363204
CAGGCGAACTGACTTCAAGTACAGAGCTCTATGCTCATCAAACAACCTGGACATACATCCTTCCAGGCACAACAAATTTGCAAATCTGAGCAAAGTCTGT
CCTTATTTCAGATGAGATAAGTAGCGGGACGCGCCGGCGTGCATCATCTCCACCGCGCAGCAGGCGAGCCCGAAGGTCATGGGCCAGATCGAGCCCTTAC
GCGCCCAGTTCATCAGGTCGTCCACCTTGGAGACCACGAACTCGGCCGTCTTCGACATCGCCGGCGGGGGCGCGCCCCCGTATGGCGCTGGGGACGTCGA
GGAGGCGCCCGCAGCAGCGGCGGCGGAGTAGGCCCGCGGAGTGGAGAGGAGGGCCAGCCGCGCGGTGCGCGGGAGCAGCGCCATGGTCGGTCGCTAGGGT
TTCCTCACCTCGTGGAGGAGGGCGTGGAAGCGTAGGCCGATTTGGGGGGATGGCTTCTCGGAGCTCTGGGGGC