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Detailed information on CNT30605275


BLAST search results

BLAST vs Swiss-Prot:
sp|P31333|RBS_GOSHI, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3083811Gossypium raimondiiVigna radiata27.396.3786.7583forward
CNT30235903Gossypium raimondiiBrassica oleracea30.0339.9184.6291forward
CNT3075093Gossypium raimondiiBrassica juncea30.0311.0884.6291forward
CNT30479769Gossypium raimondiiArabidopsis halleri32.0112.7382.4797forward
CNT30573765Gossypium raimondiiVitis vinifera30.3613.3784.7892forward
CNT3030395Gossypium raimondiiTheobroma cacao38.6146.888.03117forward
CNT30176139Gossypium raimondiiVigna angularis27.396.1886.7583forward

Expression of CNT30605275

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MSLLAFLVTGKAEADLRPVKGATMLACAGEERFTVAMVADEIMEEAIAITAYYYYMLQVYKRVSLI

Sequence

>CNT30605275
ATCCATTTAGAGCGAAGAAGGTAATCTACTTCCTTAGCCAACTGTACGGGAGTAAGATCGGGCAGGTATGAGAGAGTCTCGAACTTCTTCTTCCCAAGAG
AAGTGATGTCGTTGTTGGCCTTCCTGGTGACTGGGAAAGCAGAGGCAGATTTGAGGCCCGTGAAGGGGGCCACCATGTTGGCCTGTGCCGGGGAGGAGCG
GTTCACGGTGGCAATGGTTGCCGATGAGATCATGGAGGAGGCCATTGCTATTACTGCTTACTATTACTATATGCTACAGGTATACAAAAGAGTCTCACTG
ATC