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Detailed information on CNT30235903


BLAST search results

BLAST vs Swiss-Prot:
sp|P05346|RBS1_BRANA, E-value = 3e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30279738Brassica oleraceaChenopodium quinoa20.1815.791.346forward
CNT30605275Brassica oleraceaGossypium raimondii39.9130.0384.6291forward
CNT3030395Brassica oleraceaTheobroma cacao25.4423.287.9358forward

Expression of CNT30235903

Peptides detected in this lncRNA

>peptide 1 (75 aa)
LQLEFNTRNPLVAEKVVNFLTQFNFGNVVVGLAGDWECRGRLQAGEWSDHGGLSRGGNNSGGGEHRVSHDYFFFLL

Sequence

>CNT30235903
CTCCAACTCGAATTCAACACAAGGAATCCACTTGTTGCGGAGAAGGTAGTCAACTTCCTTACCCAATTCAACTTCGGTAATGTCGTTGTTGGCCTTGCGG
GTGACTGGGAATGCAGAGGAAGACTTCAAGCCGGTGAATGGAGCGACCATGGTGGCTTGAGCCGGGGAGGTAACAACAGCGGCGGAGGAGAGCATAGAGT
AAGCCATGACTACTTCTTCTTCCTTCTC