Detailed information on CNT30630022


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639243Vigna unguiculataNymphaea colorata45.4913.9185.5131forward
CNT30381130Vigna unguiculataManihot esculenta45.8338.8287.88132forward
CNT30526626Vigna unguiculataPhaseolus vulgaris43.435.9290.4125forward
CNT30505375Vigna unguiculataNicotiana attenuata34.3835.3691.9299forward
CNT30711140Vigna unguiculataGlycine max51.7413.2893.29149forward
CNT30156649Vigna unguiculataPistacia vera31.945.9886.9692forward
CNT30564558Vigna unguiculataActinidia chinensis45.4934.6689.31131forward
CNT30238350Vigna unguiculataBrassica oleracea29.868.3489.5386forward
CNT30207651Vigna unguiculataHelianthus annuus52.0813.0284150forward
CNT30359477Vigna unguiculataLactuca sativa41.3219.987.39119forward
CNT3058205Vigna unguiculataAmborella trichopoda46.5319.5685.07134forward
CNT3022022Vigna unguiculataPopulus trichocarpa43.427.3585.6125forward

Expression of CNT30630022

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MENMANLPFLISFTLSSAKVVALSYSIKPIDAEPFDKAHQNNLEAQHCQDALGMDKVWVAQIVKPTF*

>peptide 2 (34 aa)
GCQGGPKGSLMGLCRLQWLEQKIQTWRTWPTFHS*

>peptide 3 (31 aa)
MRNPSTRPIRTTWKPSTAKMLWAWTRFGLPK*

Sequence

>CNT30630022
TGGGTTGTCAAGGTGGTCCAAAAGGTTCTCTAATGGGCCTTTGCCGGTTACAATGGCTTGAACAAAAAATCCAAACATGGAGAACATGGCCAACCTTCCA
TTCTTGATCTCCTTCACTTTGAGCTCAGCAAAAGTTGTTGCCCTCTCCTACTCCATCAAGCCCATTGATGCGGAACCCTTCGACAAGGCCCATCAGAACA
ACTTGGAAGCCCAGCACTGCCAAGATGCTTTGGGCATGGACAAGGTTTGGGTTGCCCAAATAGTCAAGCCCACCTTCTGAGAATATCT