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Detailed information on CNT30710854


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 7e-97

BLAST vs NONCODE:
NONBNAT003428, E-value = 2e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639243Glycine maxNymphaea colorata15.8325.0583.9236forward
CNT30564558Glycine maxActinidia chinensis13.9555.0390.38208forward
CNT30357963Glycine maxLactuca sativa14.4231.2584.19215forward

Expression of CNT30710854

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MASLPFLISLTLSSAKVTGSSARPSGSKYWPPG*

>peptide 2 (35 aa)
MWFYTSKNSAMVLATGTKTFTFMYVWELKLTVFIV*

>peptide 3 (44 aa)
MLPGQQISQQCPIHNPLGILLSSMKGSHGNNIPKSIGIGTLALA*

>peptide 4 (46 aa)
METTSLRALALAPLPWPRKGVALRVPELVAAINVAAMTSNFLGLKP*

Sequence

>CNT30710854
TTAAGAAGTACACTAATCCAACAATTATTATGATCATATAATCTACACATAAATCACAAAGGCAAACACAAGGGATATGATCATAGGGATTAGGGAAGAA
GAAGTCATATACATTTAAGATCCTGGGGCAAACTTAGTGGCATAGACCCAAGCATTGTTAGCCACAGGGTTGTCAAGGTGGTCCAAGAGGTTCTCCAATG
GGCCTTTTCCAGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATGGCCAGCCTTCCATTCTTGATCTCCTTGACTTTGAGCTCAGCAAAAGT
GACTGGGTCATCAGCAAGGCCCAGTGGGTCAAAGTACTGGCCCCCAGGGTAGAGGCCCATTAGGATAACTTGGAAGCCCAGCACTGCCAGGATGCTTTGT
GCATGGACAAGGTTTGGGTTCCCCAAATAGTCAAGCCCACCTTCTGAGAATATTTGGGCTCCAGCTTTGAACCACACTGGCTCCTTGAAGTCCACTCTCA
ACCACTTCTCTAGCACCTCTGGGGTGATGCATCCTAGTGCTCCAAGCATGGCCCATCTCCCATGGATAACCTTATTCCACATAATAATTTAGTGTTTATC
ATTGGAAAAAAAATCACTTCGATTAAATTATGACACTTGATATGTATGATCCCCTTGTTGAACAAATTTAACAAATGTTCAAACTATTCACTTAGTTCCT
ATAATTGTCTTTAAATTTTTAGTTTCTATAAAGAAAATTGTAACTTTATTCCCACGGAATTTTTTGTAGCAGTTTATCACTATGTGGTTTTACACTTCCA
AAAATTCTGCTATGGTGTTAGCCACAGGAACCAAAACTTTTACTTTTATGTATGTGTGGGAACTAAAACTTACAGTTTTTATTGTATAAAGATTAAAACA
TAAAATGAAGACAGCTATAAGAATTGCTGAATAATTTAACCTTAACAATTTAAGAGTAGTAACAAGTAATAGTCAAAATAAAATTTGCTACATCATTGGT
CTCACTATGACAAATGATACTAGTCCTGCATGAAATTAAGATTCTTGTTGTAAAAGAGCAATAGAAGTCTAGAACCTTAAAACTAAAGTAAAACTAGTTA
GAACCTTCAGTACTACACTAAATTAGTTTTAAAAAAAGAATGAGAAAGAACCATTATATTTGAGTTTAAGGCTAAAAAACTACCTCAAGAGCCCTGTTCT
TGGCAAATGCTTCCGGGTCAGCAGATAAGCCAGCAGTGTCCCATCCATAATCCCCTGGGAATTCTCCTTTCAAGTATGAAGGGTTCCCATGGAAACAACA
TCCCTAAGAGCATTGGCATTGGCACCCTTGCCTTGGCCTAGGAAAGGAGTTGCTTTAAGAGTGCCAGAACTTGTTGCTGCCATCAATGTTGCTGCCATGA
CTTCCAACTTCCTAGGTTTGAAACCTTAAGTTACTTGAAAAATACTAGAAGATAACTTACTGGTTTAGAGAAATATGTGGAAGAGTGTAAC