Detailed information on CNT30615854


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499849Sesamum indicumCoffea canephora62.513.4285.71140forward
CNT30562498Sesamum indicumActinidia chinensis51.798.7286.21116forward
CNT30215028Sesamum indicumHelianthus annuus23.2114.9990.3852forward
CNT30642359Sesamum indicumCannabis sativa21.8823.2289.849forward

Expression of CNT30615854

Peptides detected in this lncRNA

>peptide 1 (36 aa)
LFARRSICKGRCQSSNGNWLRHPHITQWQATHFIWY*

>peptide 2 (45 aa)
MPKLQWELAEASPHHAMASHPFHMVLKSSLQPHLARKHQAQTYWA*

Sequence

>CNT30615854
CTGTTCGCTAGGAGAAGCATTTGCAAGGGCAGATGCCAAAGCTCCAATGGGAATTGGCTGAGGCATCCCCACATCACGCAATGGCAAGCCACCCATTTCA
TATGGTACTGAAATCATCCCTCCAGCCACACCTTGCAAGGAAACATCAGGCACAAACATATTGGGCATAAGAGGCCCAGCAGGCCTCATACCAGGTACAA
GTTGCTGTTGATACCCAAACCCAG