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Detailed information on CNT30526822


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01516|ALFC1_PEA, E-value = 6e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640893Phaseolus vulgarisNymphaea colorata35.0819.2779.89174forward
CNT30702712Phaseolus vulgarisQuercus lobata39.5223.4282.65196forward
CNT30405165Phaseolus vulgarisBeta vulgaris20.9719.8585.58104forward
CNT30710712Phaseolus vulgarisGlycine max85.2876.6391.25423forward
CNT30145300Phaseolus vulgarisMedicago truncatula28.2364.2282.86140forward
CNT30610723Phaseolus vulgarisGossypium raimondii38.9137.481.35193forward
CNT30620107Phaseolus vulgarisCajanus cajan88.131.4488.1437forward
CNT30570222Phaseolus vulgarisVitis vinifera21.1721.0481.9105forward
CNT3037127Phaseolus vulgarisCucumis melo36.0933.2182.68179forward
CNT30725414Phaseolus vulgarisLupinus angustifolius41.9423.3491.35208forward

Expression of CNT30526822

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLSLALGVLPMSSRQCFGGLWHMKMTHARGLETGSFNLRLSTR

>peptide 2 (29 aa)
FFFFFEFNNFVIHGNIFKYTTHRKRFIKL*

>peptide 3 (39 aa)
IFFFFLNSTILLYMETYSSTQLIGKGLLSCKGTCNHKQK*

Sequence

>CNT30526822
ATTTTTTTTTTTTTTTTGAATTCAACAATTTTGTTATACATGGAAACATATTCAAGTACACAACTCATAGGAAAAGGTTTATTAAGTTGTAAAGGAACAT
GTAACCATAAACAAAAATAGTCTCCAAGACTATAAAAACAGTACATTTTAGACAAATTAGTCTTTCAATTCATCCTCCGTCAACACCTACTGCAACTGCT
GGTGGTGTTGCTGCCTAACATGTATCATATGCACTAGAAACATCTTAGTAGGAGTAACCTTTGACGAACAACTCCTTCTTGGCTTCCTCAGATTCACCCT
CACCAGTGTACTTTCCAAGCTGAGCCAGTGAGTTGGACTTGGCACGGAAAAGGAGTGCATCTTGTGATGCTTTCACTTGCTCTGGGAGTCCTCCCCATGT
CTTCAAGGCAGTGTTTTGGAGGGCTCTGGCATATGAAAATGACACATGCCAGGGGTTTGGAGACTGGTAGCTTCAACCTCAGACTGTCCACCAGAC