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Detailed information on CNT30570222


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST001145, E-value = 1e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696990Vitis viniferaOryza sativa20.8412.0282.69104forward
CNT30677406Vitis viniferaSetaria viridis43.6938.3883.03218forward
CNT30524374Vitis viniferaSetaria italica23.0511.6486.96115forward
CNT30702712Vitis viniferaQuercus lobata58.3234.7786.25291forward
CNT30381342Vitis viniferaManihot esculenta57.3135.486.01286forward
CNT30526822Vitis viniferaPhaseolus vulgaris21.0421.1781.9105forward
CNT30494492Vitis viniferaOlea europaea27.6627.4483.33138forward
CNT30538767Vitis viniferaBrassica napus35.6743.4180.9178forward
CNT30439071Vitis viniferaAegilops tauschii19.0428.4484.2195forward
CNT30255936Vitis viniferaAvena sativa18.6425.2783.8793forward
CNT30662744Vitis viniferaTriticum dicoccoides43.8941.0179.91219forward
CNT30462400Vitis viniferaSaccharum spontaneum44.4916.3184.23222forward
CNT307142Vitis viniferaZea mays31.6612.6284.18158forward
CNT30610723Vitis viniferaGossypium raimondii58.5256.5986.3292forward
CNT30217689Vitis viniferaKalanchoe fedtschenkoi15.4325.6784.4277forward
CNT30345069Vitis viniferaEragrostis tef53.7146.1382.46268forward
CNT30365786Vitis viniferaSorghum bicolor35.6768.7383.15178forward
CNT30620107Vitis viniferaCajanus cajan50.918.2782.68254forward
CNT30355905Vitis viniferaLactuca sativa18.0423.9484.4490forward
CNT30371334Vitis viniferaOryza glumipatula20.8412.2882.69104forward
CNT30104026Vitis viniferaOryza rufipogon48.127.1881.67240forward
CNT30578122Vitis viniferaOryza barthii20.8413.282.69104forward
CNT30581883Vitis viniferaEchinochloa crusgalli23.4520.687.18117forward
CNT30595262Vitis viniferaEragrostis curvula36.0724.9381.11180forward
CNT30557232Vitis viniferaPanicum hallii35.6726.7781.46178forward
CNT30725421Vitis viniferaLupinus angustifolius21.4414.6285.05107forward

Expression of CNT30570222

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSLGKCSGGPWHTRMTRAMGWGLGSLRSGSGWLQLQTAHQTRTAP

Sequence

>CNT30570222
AAATATTCATTGTTCATGAGACTTCTCATGAATTGAAGTTCTAGCAAATAGATTTACGGATTGTTTGACCATTTTCTTATCTGTAGGACAACATCGGAGT
AAACATTATGCATTTGTGGTGATTTCAGGCTTTAACACATCGAGAGAGAAATGCATATTCAGCACTCCATTGTCTTCCTTTCAATCTGATTTTTTTTGCA
AGTGCAGCAGCTTAGTAGACGTAGCCCTTGACGAACATTCCCTTCTTTGCCTCCTCTGACTCTCCTTCGCCAGTGTACTTCCCGAGCTGAGCAAGAGAGT
TGGCCTTGGCACGGATCAGCAAAGCCTCTTGAGCCTCCTTCACGCTCTCAGGCCTTCCTCCCCATGTCTTTAGGCAAGTGTTCTGGAGGGCCCTGGCATA
CGAGAATGACACGTGCCATGGGTTGGGGCCTTGGTTCATTGCGTTCAGGTTCAGGGTGGCTTCAACTTCAGACTGCCCACCAGACAAGAACTGCTCCAC