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Detailed information on CNT30429165


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675831Papaver somniferumSetaria viridis22.5414.7392.580forward
CNT30523531Papaver somniferumSetaria italica22.5411.6692.580forward
CNT30547713Papaver somniferumIpomoea triloba22.549.3293.7580forward
CNT30701352Papaver somniferumQuercus lobata23.3820.9693.9883forward
CNT30500340Papaver somniferumCoffea canephora22.546.8792.580forward
CNT30616216Papaver somniferumSesamum indicum22.825.1293.8381forward
CNT30278460Papaver somniferumChenopodium quinoa23.3813.3495.1883forward
CNT3070099Papaver somniferumQuercus suber23.3814.993.9883forward
CNT30401878Papaver somniferumBeta vulgaris24.7913.7994.3288forward
CNT30524689Papaver somniferumPhaseolus vulgaris23.118.0296.3482forward
CNT30631133Papaver somniferumVigna unguiculata22.2512.3496.279forward
CNT30195551Papaver somniferumPisum sativum21.9715.1297.4478forward
CNT30487554Papaver somniferumOlea europaea22.5413.4997.580forward
CNT30503976Papaver somniferumNicotiana attenuata22.5412.949580forward
CNT30709704Papaver somniferumGlycine max21.9712.5296.1578forward
CNT3046844Papaver somniferumPrunus dulcis21.9715.3892.3178forward
CNT30165232Papaver somniferumPistacia vera21.974.4496.1578forward
CNT30635817Papaver somniferumCapsicum annuum22.8214.797.5381forward
CNT3094527Papaver somniferumSolanum tuberosum23.3815.995.1883forward
CNT30562614Papaver somniferumActinidia chinensis22.2513.4496.279forward
CNT3085655Papaver somniferumVigna radiata23.117.1296.3482forward
CNT30538256Papaver somniferumBrassica napus23.6620.3492.8684forward
CNT30234423Papaver somniferumBrassica oleracea23.6617.2591.6784forward
CNT30172276Papaver somniferumTrifolium pratense22.2516.3294.9479forward
CNT30313173Papaver somniferumCamelina sativa23.6620.3992.8684forward
CNT3060537Papaver somniferumArabidopsis lyrata23.668.0394.0584forward
CNT3074694Papaver somniferumBrassica juncea22.8217.3193.8381forward
CNT30260341Papaver somniferumBrassica rapa23.9421.3692.9485forward
CNT30612193Papaver somniferumArabis alpina22.2517.6794.9479forward
CNT30597553Papaver somniferumFraxinus excelsior22.8217.0996.381forward
CNT30610456Papaver somniferumGossypium raimondii24.799.4692.0588forward
CNT30652772Papaver somniferumRosa chinensis22.2513.2894.9479forward
CNT30202986Papaver somniferumHelianthus annuus21.9714.6194.8778forward
CNT30715353Papaver somniferumMalus domestica golden23.386.7592.7783forward
CNT30625213Papaver somniferumDaucus carota20.5613.5797.2673forward
CNT30477439Papaver somniferumArabidopsis halleri22.2513.0893.6779forward
CNT30621254Papaver somniferumCajanus cajan22.5414.559580forward
CNT30596688Papaver somniferumOryza meridionalis22.8215.0393.8381forward
CNT30355299Papaver somniferumLactuca sativa22.8211.6592.5981forward
CNT30153721Papaver somniferumPrunus persica21.9715.8293.5978forward
CNT30704139Papaver somniferumPrunus avium21.9715.4594.8778forward
CNT30642554Papaver somniferumCannabis sativa23.3814.3893.9883forward
CNT3026341Papaver somniferumPopulus trichocarpa23.384.2393.9883forward
CNT30324349Papaver somniferumAsparagus officinalis21.9716.3293.5978forward
CNT30120214Papaver somniferumCitrus clementina23.115.9895.1282forward
CNT30584684Papaver somniferumEchinochloa crusgalli22.5416.7492.580forward
CNT30604511Papaver somniferumOryza punctata22.8215.5592.5981forward
CNT30112246Papaver somniferumFicus carica23.114.793.982forward
CNT30723632Papaver somniferumLupinus angustifolius23.113.9296.3482forward
CNT3050740Papaver somniferumCucumis sativus22.2511.9793.6779forward
CNT30115398Papaver somniferumEutrema salsugineum22.2516.1293.6779forward

Expression of CNT30429165

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTKDFTHLGFHSRKAVFQHIKLQRKECLSS*

Sequence

>CNT30429165
CAGGAACCTAAGTCGATAGTATAAATAATCGCAAACCCTTTCCAAATCTCTCGTCTTCTCCGCAGTAACCCTGGCTGGTTTTCGTTTTTAGGGTTTTGAG
AGAAGCAAACAAGTTTCAGTTGCAATCACCACCATGAGGGCTAAGTGGAAGAAGAAGCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGACAAA
GATCTAAGTAGAGAGAAAGATGACGAAGGATTTCACTCATCTAGGGTTTCATTCTCGGAAAGCGGTATTCCAACATATCAAGCTTCAAAGAAAAGAATGT
CTCAGTAGTTAGCACTAGTGGGTGGGGCTACTGTGATACGAGTGAAAATTATGGC