Detailed information on CNT30515578


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MMT7|PETN_ILLOL, E-value = 1e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202193Juglans regiaPisum sativum38.8711.7989.31131reverse complement
CNT30221158Juglans regiaHordeum vulgare29.3815.8191.9299reverse complement
CNT30434962Juglans regiaAegilops tauschii34.127.990.43115forward
CNT3017973Juglans regiaZea mays29.387.3193.9499reverse complement
CNT30606608Juglans regiaGossypium raimondii27.312.6591.392forward
CNT30100227Juglans regiaOryza rufipogon34.1227.1992.17115reverse complement
CNT30585671Juglans regiaEchinochloa crusgalli29.387.3392.9399reverse complement
CNT30335891Juglans regiaCynara cardunculus23.742.487.580forward

Expression of CNT30515578

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKELFHYCSLIIIMLINNSGIPGEESKWDSNPTPL

Sequence

>CNT30515578
TGAGGGGGAAACCAAAAACAAATAAAAAAGTAAAATAAAAAGGACTTTGCAGGATGATCTATAAAACAAATGATATGGTTTGAGTTTGATTCTTCAACTC
AATTAGTAGTACTTCTAGATTCCACTTCTACCCCATACTACGAGTGAAAGAGAAAATGTAAAGACTACCATTAAAGCAGCCCAAGTGAGACTTACTATAT
CCATGTGAATTATAACCCCAATCTTTATAAATATGAAGGAATTATTCCATTATTGTTCACTAATCATTATTATGTTAATTAATAATAGTGGAATCCCTGG
AGAAGAGTCAAAATGGGATTCTAACCCAACACCGTTG