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Detailed information on CNT30221158


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MMT7|PETN_ILLOL, E-value = 9e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515578Hordeum vulgareJuglans regia15.8129.3891.9299reverse complement
CNT30100227Hordeum vulgareOryza rufipogon45.2166.991.52283forward

Expression of CNT30221158

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVKKSSIHKKIRLSSMELFTAYHTFSICFILFLYS*

>peptide 2 (29 aa)
MDIVSLSWVALMVVFTFSLSLVVWGRSGL*

Sequence

>CNT30221158
TACAAGAATTCCTATAAGAATTTGTTAGGAGTAAATTCCTTGAACTGATTGATCCATGGCCTTAGGGCAGAAGCCCTTTTTGACTCTGTACCCTTGATTC
CACTATGATTATTGATCAATAGTAGAATAATCCCTTCATAGAAATAGGAGACATAATTTAGATGGATATAGTAAGTCTCTCTTGGGTTGCTTTAATGGTA
GTCTTTACATTTTCTCTTTCACTAGTAGTATGGGGAAGGAGTGGACTCTAGGGATACGATACTACTAATTGATTAAGTAATCAAATTGTTCTATCAATTC
TTTTTTTAATTGATCATTTTGCATTAATTATTTTGTCAAACATTATTCTTTAATCTTTTTTCTTTAGTTTTGTTTCACTCCTATAAGAAACTCTTGTATT
GTAAGAAAGAGCCATTATACCAATTAAGAATTTCTACTAGAAATGACTAATGGTTAAAAAAAGTTCTATACATAAGAAAATTAGACTTTCTTCCATGGAA
CTATTCACGGCATATCACACATTTTCCATTTGTTTTATACTCTTTCTTTATTCTTAGAATAATTTTTATTCTCTTTTGAAGCATCTCGCGGGATATTTAA
GCATGAAAGATTCGCTGGTTTTTTCC