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Detailed information on CNT30202193


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7HKY0|PETN_CALFG, E-value = 6e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515578Pisum sativumJuglans regia11.7938.8789.31131reverse complement
CNT30100227Pisum sativumOryza rufipogon11.1629.3190.32124forward

Expression of CNT30202193

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGKKWTLKVILIELSIKLSQFFSSWGSSSFELLFNTN*

>peptide 2 (30 aa)
CQFYSKSDKNLLDVLIGCFANGVRRNGILF*

>peptide 3 (29 aa)
MDIVSLAWAALMVVFTFSLSLVVWGRSGL*

>peptide 4 (35 aa)
MKIRRIKIALLFHYFRLIGTNTKRIDLDEMWTPWN*

Sequence

>CNT30202193
TTGTCAATTCTACTCCAAATCTGATAAGAACTTGCTAGATGTTCTAATTGGATGTTTCGCCAATGGTGTTAGGAGGAATGGAATCCTTTTTTGACTCTGT
ACCAGCGATTCCACTATTATTATAAGATATTCTCCAATTTTAGTGAAAAAGAAAAACAAAAAGAATACAAGAAAAATGAGTAAACAATAAAAAAAGAATT
ATAAAAAGAATTGATTCATATTGATATAGATAGGAGACATAATTGACATGGATATAGTAAGTCTTGCTTGGGCTGCTTTAATGGTAGTTTTTACATTTTC
CCTTTCCCTTGTAGTATGGGGAAGAAGTGGACTCTAAAGGTAATACTAATTGAGTTAAGCATCAAACTGTCTCAATTTTTTTCTAGCTGGGGTTCTTCCA
GTTTTGAACTATTATTTAATACTAATTAATGAAATAAATTTTTATTTAGATTTAGAAATTCTATTGTATTCCAGTGGTGTAATATATATATAATCTTGAA
AAAAAAAAAAGCTATTTGAATCAAACAAATATTGAAATTGTTGCCATCTTGATATCCCGGAATCCAGATAATTGGAAACGGATTACTATTCCAAACTTAA
TTATTTTGAATATTTATATTCAATTTAATCAAATTAAATTTTGGAATACTAAAAAGATTCTTTCTTTTTATTTATTAGTTACCGGGATTCTGAAAAGAAT
CGGAAATCTCAAATGAAAATAAGAAGAATAAAAATTGCGTTGCTTTTTCATTATTTCAGATTGATTGGAACCAATACAAAGAGAATCGATTTAGATGAAA
TGTGGACGCCATGGAATTGACATTCCATCTATATCCATAGATCGATATCCATATATCCATATGAAAAGAAAATGATAGATTGGTTCCTCCATATTCACTC
TTTTTTTTTTTAGTAAAACATTCTATTTTTATCCTTCCTACCGTAATAGATAATATAGTAGAAACAAATTGATTTTATTTCTTTCTACTATATGGATTTA
ATAGAATTCTGCTGGTTGTAACCTTCTTTCATTTTATTTTAAAGAATAAAATTCATTAGTCGTCCAATAACACGTAACAATAATAGCAGTAGAGACATAT
CCAAGAATGAC