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Detailed information on CNT30512731


BLAST search results

BLAST vs Swiss-Prot:
sp|P12357|PSAG_SPIOL, E-value = 2e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520575Juglans regiaSetaria italica44.6535.4781.51238forward
CNT30639925Juglans regiaNymphaea colorata47.2838.1280.16252forward
CNT30701397Juglans regiaQuercus lobata32.4639.3289.6173forward
CNT30616151Juglans regiaSesamum indicum54.2211.8880.97289forward
CNT30525658Juglans regiaPhaseolus vulgaris20.6437.4181.82110forward
CNT30709225Juglans regiaGlycine max28.3322.2485.43151forward
CNT30394697Juglans regiaTriticum turgidum41.4634.9183.26221forward
CNT30590999Juglans regiaMusa acuminata19.3234.5686.41103forward
CNT30541835Juglans regiaBrassica napus49.3442.7683.65263forward
CNT30236818Juglans regiaBrassica oleracea49.3434.8384.03263forward
CNT30666063Juglans regiaTriticum dicoccoides19.8924.0985.85106forward
CNT3081347Juglans regiaBrassica juncea49.3441.6884.03263forward
CNT30263615Juglans regiaBrassica rapa49.7236.8184.15265forward
CNT30449622Juglans regiaSaccharum spontaneum53.144.5779.51283forward
CNT3013389Juglans regiaZea mays44.0954.1580.43235forward
CNT30608608Juglans regiaGossypium raimondii12.0123.3685.9464forward
CNT30652143Juglans regiaRosa chinensis52.725085.41281forward
CNT30625145Juglans regiaDaucus carota54.0334.9181.94288forward
CNT30350071Juglans regiaEragrostis tef27.0228.6384.72144forward
CNT30362701Juglans regiaSorghum bicolor40.5334.3980.09216forward
CNT30620686Juglans regiaCajanus cajan50.6624.7584.44270forward
CNT30358284Juglans regiaLactuca sativa36.2132.9481.35193forward
CNT30330447Juglans regiaDioscorea rotundata15.5729.7586.7583forward
CNT30577680Juglans regiaOryza barthii21.7625.4985.34116forward
CNT30580733Juglans regiaEchinochloa crusgalli40.1528.3480.37214forward
CNT30723556Juglans regiaLupinus angustifolius50.8433.4678.97271forward
CNT3049834Juglans regiaCucumis sativus56.6650.7680.46302forward
CNT30114891Juglans regiaEutrema salsugineum15.3830.4884.1582forward

Expression of CNT30512731

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVGEKLGVENKEEDAAIFLSFFVSRGIEYG

>peptide 2 (47 aa)
ICRERERVSDLLKSLKRTWDHSRCWRWPRYSKQRCGQWNPKRGRPRC*

>peptide 3 (53 aa)
MWPMEPQARTSTMLKPTGSLDLRRLTYSLARVSPASKWVSPFCSGTCLATFSL*

Sequence

>CNT30512731
TATATGTAGGGAGAGAGAGAGAGTGAGTGATTTATTGAAATCACTCAAAAGAACTTGGGATCATAGCCGTTGCTGGAGGTGGCCAAGATATAGTAAGCAA
CGATGTGGCCAATGGAACCCCAAGCGAGGACGTCCACGATGTTGAAGCCAACGGGGTCATTAGATTTGAGGAGGCTAACGTATTCCTTAGCCCGAGTGTC
GCCAGCCTCGAAGTGGGTCAGTCCATTCTGCTCAGGCACCTGCTTGGCCACGTTCTCCCTCTGAAAATTGAAGAAGACGAACCTCCCCAGGAATAGAGAG
AGACCAGTGCTGAGGCTTATCACCAGTGATGGGTTCAGCTCTGCCTTCACAACGGCCCCAGTACTACTAGTACTTGTTTTGGGTGTGGTGGTGAACTTGG
TTCTGGGCGCCAACTTGGTGGGTCTGGTACTGGTGCCTTTGGATGGTGGGTGAGAAGCTTGGAGTGGAGAACAAGGAGGAGGACGCTGCCATTTTTCTTT
CTTTTTTTGTTTCGAGAGGAATAGAATATGGAT