Detailed information on CNT30590999


BLAST search results

BLAST vs Swiss-Prot:
sp|P20120|PSAG_PEA, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520541Musa acuminataSetaria italica35.2321.7892.38105forward
CNT30639925Musa acuminataNymphaea colorata39.931883.19119forward
CNT30512731Musa acuminataJuglans regia34.5619.3286.41103forward
CNT30616151Musa acuminataSesamum indicum35.914.490.65107forward
CNT30708956Musa acuminataGlycine max25.8423.6288.3177forward
CNT30394760Musa acuminataTriticum turgidum38.2616.5785.09114forward
CNT30543069Musa acuminataBrassica napus34.926.686.54104forward
CNT3059545Musa acuminataArabidopsis lyrata24.1631.1787.572forward
CNT3082005Musa acuminataBrassica juncea34.911.8589.42104forward
CNT30263615Musa acuminataBrassica rapa34.914.4486.54104forward
CNT30449622Musa acuminataSaccharum spontaneum35.2316.5489.52105forward
CNT3013389Musa acuminataZea mays20.1313.8291.6760forward
CNT30625145Musa acuminataDaucus carota31.8811.5283.1695forward
CNT30350071Musa acuminataEragrostis tef41.2824.4590.24123forward
CNT30362978Musa acuminataSorghum bicolor35.2316.188.57105forward
CNT30577680Musa acuminataOryza barthii41.9527.4790.4125forward
CNT30581311Musa acuminataEchinochloa crusgalli35.2313.4389.52105forward
CNT30114891Musa acuminataEutrema salsugineum32.8936.4387.7698forward

Expression of CNT30590999

Peptides detected in this lncRNA

>peptide 1 (98 aa)
VTPFCSGRPCFATFSRWKLKKTNLPRKRERPVLRLMTSDGFSSDRIEPGLTATARVWGSLQESVGLRGRRPWKEGVKTVEAMGEFGREYCLFSLLSLSL

>peptide 2 (97 aa)
HAVLLRQALLRHVLALEVEEDEPAQEEGEAGAEADDQRRVQLRPDRTGLDGDGPRLGQLAGVGRLEGSEAMEGGGEDSGSHGGVWQGVLFVLTPLSLS

Sequence

>CNT30590999
GTCACGCCGTTCTGCTCCGGCAGGCCCTGCTTCGCCACGTTCTCGCGCTGGAAGTTGAAGAAGACGAACCTGCCCAGGAAGAGGGAGAGGCCGGTGCTGA
GGCTGATGACCAGCGACGGGTTCAGCTCCGACCGGATCGAACCGGGCTTGACGGCGACGGCCCGCGTCTGGGGCAGCTTGCAGGAGTCGGTCGGCTTGAG
GGGTCGGAGGCCATGGAAGGAGGGGGTGAAGACAGTGGAAGCCATGGGGGAGTTTGGCAGGGAGTACTGTTTGTTCTCACTCCTCTCTCTCTCTCTCT