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Detailed information on CNT30114891


BLAST search results

BLAST vs Swiss-Prot:
sp|P20120|PSAG_PEA, E-value = 3e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520541Eutrema salsugineumSetaria italica52.7929.4681.69142forward
CNT30512731Eutrema salsugineumJuglans regia30.4815.3884.1582forward
CNT30616151Eutrema salsugineumSesamum indicum64.687.1583.91174forward
CNT30394760Eutrema salsugineumTriticum turgidum39.7815.5584.11107forward
CNT30590999Eutrema salsugineumMusa acuminata36.4332.8987.7698forward
CNT30541835Eutrema salsugineumBrassica napus93.3140.8193.63251forward
CNT30236818Eutrema salsugineumBrassica oleracea93.3133.2594.02251forward
CNT30313790Eutrema salsugineumCamelina sativa39.4132.4290.57106forward
CNT3059545Eutrema salsugineumArabidopsis lyrata40.1546.7592.59108forward
CNT3081347Eutrema salsugineumBrassica juncea7130.2792.67191forward
CNT30262128Eutrema salsugineumBrassica rapa93.3134.6294.42251forward
CNT30449622Eutrema salsugineumSaccharum spontaneum50.9321.5781.75137forward
CNT3013389Eutrema salsugineumZea mays35.3221.8983.1695forward
CNT30652143Eutrema salsugineumRosa chinensis47.5822.7882.81128forward
CNT30350071Eutrema salsugineumEragrostis tef45.3524.2586.07122forward
CNT30362978Eutrema salsugineumSorghum bicolor42.0117.3382.3113forward
CNT30620686Eutrema salsugineumCajanus cajan28.627.0684.4277forward
CNT30577680Eutrema salsugineumOryza barthii44.9826.5983.47121forward
CNT30581311Eutrema salsugineumEchinochloa crusgalli52.7918.1681.69142forward

Expression of CNT30114891

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MGLARLSRRRRGRRPWNEMEFGFFWEIAVENVPEGR

>peptide 2 (69 aa)
LTYSLARSSPASKWVLPFCSGKPCLATFSLWKLKKTNRPRKRERPVLRLITTDGLSSALTTAERTEAME*

>peptide 3 (55 aa)
ADVFLGTIIAGFEVGFTVLLRQALFGHILSLEVEENESAEEEGETRAEAYNDGWA*

Sequence

>CNT30114891
GGCTGACGTATTCCTTGGCACGATCATCGCCGGCTTCGAAGTGGGTTTTACCGTTCTGCTCCGGCAAGCCCTGTTTGGCCACATTCTCTCTCTGGAAGTT
GAAGAAAACGAATCGGCCGAGGAAGAGGGAGAGACCCGTGCTGAGGCTTATAACGACGGATGGGCTTAGCTCGGCTCTCACGACGGCGGAGAGGACGGAG
GCCATGGAATGAGATGGAGTTTGGGTTTTTCTGGGAGATTGCAGTGGAGAATGTACCAGAGGGAAGATG