Detailed information on CNT3046253


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618167Prunus dulcisSesamum indicum62.4423.0985.71133reverse complement
CNT30236426Prunus dulcisBrassica oleracea27.719.4789.8359reverse complement
CNT30553486Prunus dulcisOryza glaberrima30.9922.387.8866reverse complement
CNT3081558Prunus dulcisBrassica juncea27.77.3789.8359forward
CNT30626010Prunus dulcisDaucus carota32.3922.6286.9669reverse complement
CNT30356369Prunus dulcisLactuca sativa51.645.8585.45110reverse complement
CNT3026410Prunus dulcisPopulus trichocarpa42.7229.9390.1191reverse complement
CNT30576032Prunus dulcisOryza barthii30.9922.387.8866reverse complement
CNT30334668Prunus dulcisCynara cardunculus51.6418.5283.64110reverse complement

Expression of CNT3046253

Peptides detected in this lncRNA

>peptide 1 (70 aa)
GWHRPIILPPPGAGGDRCSVKPALRNSLHSRNHEAQSLRPSHMAQLLAWNGQARIEPLRTDPLYWANVPTP

Sequence

>CNT3046253
GGGTGGCACCGACCCATTATCCTTCCACCACCAGGAGCGGGAGGTGATCGTTGCTCTGTGAAGCCAGCCTTACGCAATTCCCTCCACTCTAGGAACCATG
AAGCCCAAAGCCTTCGCCCAAGCCACATGGCCCAACTTCTAGCTTGGAATGGGCAGGCCAGAATAGAGCCACTCCGAACCGACCCACTATATTGGGCCAA
TGTTCCAACACCT