Detailed information on CNT30576032


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046253Oryza barthiiPrunus dulcis22.330.9987.8866reverse complement
CNT30553486Oryza barthiiOryza glaberrima100100100296forward
CNT30595935Oryza barthiiOryza meridionalis62.8463.2791.4186forward
CNT30154412Oryza barthiiPrunus persica22.321.6489.3966forward

Expression of CNT30576032

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PSSAARACNPSGGIKVVWTLPYGCAPGLAVP*

>peptide 2 (62 aa)
RAQQRELVTRAGALRWCGRCRMAARLGWQCHRWPARSKLRSWASGAWAKALGLTVPRVAGIA*

Sequence

>CNT30576032
GCCGAGCTCAGCAGCGCGAGCTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGCGCCTGGGTTGGCAGTGCCATAGATG
GCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCAGCGGGGCTTGGGCGAAAGCTCTGGGCCTCACGGTTCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTT
CATAAAATCCACTCTCTACCCTTATTCGTGGTTTGATTGATGAATTACATGGGCAACGCAGGTGATGGCGTTCCTGGCGCGGCCGGACAAGACGTC