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Detailed information on CNT30307995


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193534Triticum aestivumSecale cereale85.3499.8396.43588forward
CNT30226224Triticum aestivumHordeum vulgare50.898.0497.14350forward
CNT30443328Triticum aestivumAegilops tauschii88.8297.6199.84612forward

Expression of CNT30307995

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTRLGYLWGVCTWRLWRPNKITRLGYLWVQ*

>peptide 2 (82 aa)
LESLTAGCEDRMFRSVGFGFTDVVIAGVWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPA*

Sequence

>CNT30307995
CCTTGGAGTCATTAACAGCTGGTTGTGAAGACAGAATGTTTAGATCTGTTGGATTTGGCTTTACAGATGTCGTAATAGCCGGTGTCTGGGCTGCAGGAGT
TGAACTCTGTGTTGGTATTCCCACGGTGCCAAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGCGAAGTACCTCCCAATGGACTTGCACTTTTC
TTGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGCCTGATTTAGCCCACTTAGACCACCTCCTACGGGTGGCCTTGGCGCGATTCCCT
GAGCAGGGGGGATGTTTGCATTTGGAGGTTGTGGCGGCCTAACAGGATGACCCGGTTGGGGTACTTGTGGGGTGTTTGCACTTGGAGGTTGTGGCGGCCT
AACAAGATTACCCGGTTGGGGTACTTGTGGGTTCAATGATGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGAGTGTGTTGACGAGGACCTAATGCC
TGAGTGGGCTGTGGGGGGCTAGCGACACTGTTTGTCTGAGGAGCTGCGGTTGGGATATTTATACGGGGAGCAGGAATTTTTGCAGCAGCGGGACCGAATA
ATGCTGACTTAACAATGTCTGGTGTCAACTGTCGGCCACTCTGTGCAACTGTCACTAGTTTAAGCGAGTTGAAAAAATCTTCACGCCCA