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Detailed information on CNT30381458


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 3e-80

BLAST vs NONCODE:
NONPOPT000587, E-value = 9e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549537Manihot esculentaIpomoea triloba45.5848.0582.81320forward
CNT30708643Manihot esculentaGlycine max39.650.0987.05278forward
CNT30508528Manihot esculentaSolanum lycopersicum28.2138.1583.84198forward
CNT30218287Manihot esculentaKalanchoe fedtschenkoi58.1278.6180.88408forward
CNT30650282Manihot esculentaRosa chinensis43.1625.7288.45303forward
CNT3055147Manihot esculentaAmborella trichopoda41.3129.9682.07290forward
CNT30101941Manihot esculentaOryza rufipogon45.5838.3280320forward
CNT30551132Manihot esculentaOryza brachyantha22.9341.7183.23161forward

Expression of CNT30381458

Peptides detected in this lncRNA

>peptide 1 (39 aa)
QNNYLVHFAAALLQDSSITSSAIKLNKILLHFYSTNTGK*

Sequence

>CNT30381458
GCCAAAATAACTACTTAGTACATTTTGCCGCTGCCCTGCTGCAAGACAGCTCAATTACTTCCAGTGCAATCAAATTAAACAAAATTCTCCTACATTTTTA
TAGCACCAACACTGGTAAATGAAACGTGGTAAAAAAGAAATAAAATTGAATAGGGCATTTTATGTATTAGATTAGACCATTGCAGACTTTTAGATTTGTA
GTGCAGCAGTAAGAAACACGCCAACTTATTCATCAACCAGCCAAAGCAAGCACCGACAGCAGGGATAGGATAAATCACACTTAAGCCTGAGGCTTATCCC
ACTTGAGGGGCTTGACGACCTCCCAGGTGAAGTCTGGGTCATCTCTTCCAAAGTGTCCATAGGCAGCTGTCTTCAAGAACCTGTTGATGGTCATCATTCC
AGGTCTAAAGTCAAAATTCTCTTTCACAATCTTGAGAATCTCCTTGTCAGGAATCTTTCCTGTTCCATAGGTGTCCACAAAGACAGACAAAGGCTCAGGA
ACACCAATGGCATAGGAAACCTGCACGATACACCGGCGAGCAAGACCATTTGCTACAATACTCTTGGCTGCCTGCCTAACAATATAAGCACCGCTCCTGT
CCACCTTGGTTGGGTCCTTTCCTGAAAAGGCACCACCACCATGGGCCCCCCAGCCACCATAGGTGTCAATAATGATCTTGCGTCCAGTTAGTCCTGCATC
AC