Detailed information on CNT30708643


BLAST search results

BLAST vs Swiss-Prot:
sp|Q944U4|METK_DENCR, E-value = 2e-64

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698521Glycine maxQuercus lobata33.1532.886.96184forward
CNT30729048Glycine maxCorchorus capsularis46.3139.1886.38257forward
CNT30381458Glycine maxManihot esculenta50.0939.687.05278forward
CNT30189384Glycine maxSecale cereale40.928.8881.06227forward
CNT30301451Glycine maxTriticum aestivum53.1582.479.66295forward
CNT30508528Glycine maxSolanum lycopersicum4042.7783.33222forward
CNT30437887Glycine maxAegilops tauschii47.933879.32266forward
CNT30608385Glycine maxGossypium raimondii53.8754.3683.95299forward
CNT3055147Glycine maxAmborella trichopoda49.0128.181.99272forward
CNT30101941Glycine maxOryza rufipogon52.6134.9780.48292forward
CNT30496713Glycine maxDigitaria exilis49.3718.1981.02274forward

Expression of CNT30708643

Peptides detected in this lncRNA

>peptide 1 (58 aa)
CIIPSKVSISSCLEEPMTTPLKVQVNGDHSRSEVEILLHNLQNLLVRNLPSSISVHKH*

Sequence

>CNT30708643
TCTGCATCATCCCTTCCAAAGTGTCCATAAGCAGCTGTCTTGAGGAACCTATGACCACCCCTCTTAAGGTCCAAGTTAATGGTGATCATTCCAGGTCTGA
AGTCGAAATTCTCCTTCACAATTTGCAGAATCTCCTTGTCAGGAATCTTCCCAGTTCCATAAGTGTCCACAAACACTGACAAGGGCTCAGGGACACCAAT
GGCATAGGAAACTTGCACAATGCACCTTCTAGCAAGGCCATTTGCCACGACACTCTTTGCAGCCTGCCTTACAATATAGGCACCACTTCTGTCAACCTTG
GTAGGGTCCTTCCCTGAAAAGGCACCTCCACCATGAGCACCCCAGCCACCATAGGTACTTCTCAGGAATGACAGGCTTGATAACATGCTCTTTAAGGTCC
GCAGCAATTTGATCATTGCTCACAGTCTCATCATGTTGGGTGGAAATTAGGACAGTGTGGACACGAACTGGAACCATGGCACCATTGTCATTGTAGTACT
CGACGGTTACTTGTGTCTTACCATCTGGCCTCAACCAAGCACAGGTGCCATTCTT