Detailed information on CNT30379481


BLAST search results

BLAST vs Swiss-Prot:
sp|P12858|G3PA_PEA, E-value = 1e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676468Manihot esculentaSetaria viridis42.018.6183.792forward
CNT30523847Manihot esculentaSetaria italica42.019.1983.792forward
CNT30490066Manihot esculentaOlea europaea49.7712.2286.24109forward
CNT3093146Manihot esculentaSolanum tuberosum47.9530.3584.76105forward
CNT3088037Manihot esculentaVigna radiata58.99.686.05129forward
CNT30541340Manihot esculentaBrassica napus58.452086.72128forward
CNT30119382Manihot esculentaCitrus clementina64.3815.5183.69141forward
CNT3065586Manihot esculentaSelaginella moellendorffii23.7421.6792.3152forward

Expression of CNT30379481

Peptides detected in this lncRNA

>peptide 1 (61 aa)
AIRNNLDDLAVDRDTILSRLNISIEDAKGGIVLEEMRGLLDTASVVNGDNIQRGILTSMPA*

>peptide 2 (35 aa)
RSETTLMTLPSTEIPFSAGLTSASKMPRVESYLRR*

Sequence

>CNT30379481
TGCGATCAGAAACAACCTTGATGACCTTGCCGTCGACAGAGATACCATTCTCAGCAGGCTTAACATCAGCATCGAAGATGCCAAGGGTGGAATCGTACTT
GAGGAGATGAGAGGCTTGCTTGATACCGCCAGTGTCGTTAATGGCGATAACATCCAGAGGGGAATCCTTACGTCCATGCCAGCCTGAGAATTCTTGGAAT
CCCTTTCCATTTCCCTGAA