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Detailed information on CNT30490066


BLAST search results

BLAST vs Swiss-Prot:
sp|P25856|G3PA1_ARATH, E-value = 2e-123

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371585Olea europaeaArabidopsis thaliana28.3664.7179.84253forward
CNT30379481Olea europaeaManihot esculenta12.2249.7786.24109forward
CNT30524759Olea europaeaPhaseolus vulgaris20.7415.1380185forward
CNT30628639Olea europaeaVigna unguiculata29.4836.9979.09263forward
CNT30196808Olea europaeaPisum sativum5.6121.19050forward
CNT30712487Olea europaeaGlycine max18.9522.1584.02169forward
CNT3093146Olea europaeaSolanum tuberosum10.0926.0188.8990forward
CNT30288286Olea europaeaTriticum aestivum1320.3981.03116forward
CNT30385999Olea europaeaTriticum turgidum16.3727.580.82146forward
CNT3088037Olea europaeaVigna radiata28.4818.979.92254forward
CNT30541340Olea europaeaBrassica napus18.7226.0980.84167forward
CNT30509382Olea europaeaSolanum lycopersicum14.9120.8180.45133forward
CNT30146657Olea europaeaMedicago truncatula29.3723.8880.92262forward
CNT30658162Olea europaeaTriticum dicoccoides16.4826.3980.95147forward
CNT30310642Olea europaeaCamelina sativa30.4941.6577.94272forward
CNT30215929Olea europaeaHelianthus annuus34.5332.6680.52308forward
CNT30680437Olea europaeaTriticum urartu1322.2681.03116forward
CNT30353979Olea europaeaEragrostis tef8.6328.3185.7177forward
CNT30622201Olea europaeaCajanus cajan13.1252.783.76117forward
CNT30356846Olea europaeaLactuca sativa15.0226.0783.58134forward
CNT30481607Olea europaeaChara braunii27.4740.6381.63245forward
CNT30572796Olea europaeaVitis vinifera14.2424.0581.89127forward
CNT30119544Olea europaeaCitrus clementina20.415.8382.42182forward
CNT30330803Olea europaeaDioscorea rotundata16.9324.4382.12151forward
CNT30726265Olea europaeaLupinus angustifolius17.623.5482.17157forward
CNT3065586Olea europaeaSelaginella moellendorffii10.8740.4285.5797forward

Expression of CNT30490066

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAITESKSSFVLLANGREEDELRSPAKSENPL

>peptide 2 (37 aa)
MQHSLLRRMSSSRPGQQDPLRKRWELGHEEQYHSAFL*

>peptide 3 (98 aa)
GSSHTDKIPLSSLSAASLNAAFTSSANVFFSTWTTRSTTETLGVGTRRAIPFSFPLSCGRTRATAFAAPVEVGTMLRAAARARRRSLWLASRSLWSPV*

Sequence

>CNT30490066
GGCTCGTCGCACACAGATAAGATACCATTGAGTTCCTTATCGGCAGCCTCCCTGAATGCAGCATTCACTTCTTCGGCGAATGTCTTCTTCTCGACCTGGA
CAACAAGATCCACTACGGAAACGTTGGGAGTTGGGACACGAAGAGCAATACCATTCAGCTTTCCTTTGAGCTGTGGAAGGACGAGAGCCACGGCCTTTGC
AGCTCCGGTCGAGGTAGGAACAATGTTGAGAGCTGCAGCTCGTGCACGGCGAAGATCCCTGTGGCTTGCGTCAAGAAGTCTCTGGTCTCCAGTGTAGGAG
TGAGTAGTTGTCATTGTTCCCTTAATAATGCCTACGAGCAAATAAATAGTGCTAACACTAATTATATTGTCTAGTACTGCATACTAAACATAAACACCAC
TATCCGACATGTAAGTCCGTAAGTGTGCGGCCGTGTATTGCGGAAATGCATTACCGAATTTCTGGTCGAGGACTTTGACAAAAGGCGCAAGGCAGTTGGT
AGTGCACGAAGCATTGCTGATAATAGGCTCATCAGGATTGTAATCACCAGCATTTACTCCAACAACATAGGTAGGAATATCACCCTTACCAGGAGCTGTG
ATAAGTACCTTCTTTGCTCCAGCTTTAATGTGTTTGACATCGGCTTCAAAGATACCGAGGGTGGAGTCGTATTTGAGAAGGTGAGAGGCTTGCTTGATAC
CGCCAGTGTCGTTGACGGCAATCACGTCAAGAGGGGAATCCTTCCTTCCGTGCCAGCATCTCAAGAAATTCCTTCCAATTCTTCCGAAACCATTGATGGC
AATAACAGAAAGCAAATCATCATTTGTCCTCCTCGCGAATGGAAGAGAGGAAGACGAACTGCGAAGCCCCGCAAAGTCAGAGAATCCCTTGC