Detailed information on CNT3065586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372815Selaginella moellendorffiiArabidopsis thaliana22.9219.6490.9155forward
CNT30268339Selaginella moellendorffiiChenopodium quinoa27.087.9989.2365forward
CNT30379481Selaginella moellendorffiiManihot esculenta21.6723.7492.3152forward
CNT30524716Selaginella moellendorffiiPhaseolus vulgaris30.839.4586.4974forward
CNT30490066Selaginella moellendorffiiOlea europaea40.4210.8785.5797forward
CNT30123402Selaginella moellendorffiiPhyscomitrium patens20.836.229050forward
CNT3088037Selaginella moellendorffiiVigna radiata29.585.2885.9271forward
CNT30541340Selaginella moellendorffiiBrassica napus25.429.5388.5261forward
CNT30244006Selaginella moellendorffiiAvena sativa20.8312.259050forward
CNT30231796Selaginella moellendorffiiAnanas comosus38.3324.482.6192forward
CNT30353979Selaginella moellendorffiiEragrostis tef23.3320.5991.0756forward
CNT30357074Selaginella moellendorffiiLactuca sativa4520.2283.33108forward
CNT30330803Selaginella moellendorffiiDioscorea rotundata23.339.0687.556forward

Expression of CNT3065586

Peptides detected in this lncRNA

>peptide 1 (78 aa)
LTKGARQFVVQEALLMIGSVGLYCSAFTPTTYVGMAPFPGAVPSMESYLRRWDACLTPPVSLMTITSNGESFLPCQQRM

>peptide 2 (79 aa)
FDEGSQAVRRAGGVADDRLRGTVLLGVHSDDVRWNGTLSRGCSKHGIVFEEMGCLLDTASVVDDNHVQWRVLPAVPAADE

Sequence

>CNT3065586
TTTGACGAAGGGAGCCAGGCAGTTCGTCGTGCAGGAGGCGTTGCTGATGATCGGCTCCGTGGGACTGTATTGCTCGGCGTTCACTCCGACGACGTACGTT
GGAATGGCACCCTTTCCAGGGGCTGTTCCAAGCATGGAATCGTATTTGAGGAGATGGGATGCTTGCTTGACACCGCCAGTGTCGTTGATGACAATCACGT
CCAATGGCGAGTCCTTCCTGCCGTGCCAGCAGCGGATGAA