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Detailed information on CNT30619791


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675831Cajanus cajanSetaria viridis30.0414.5593.6779forward
CNT30523531Cajanus cajanSetaria italica30.0411.5293.6779forward
CNT30533222Cajanus cajanEucalyptus grandis30.0424.3194.9479forward
CNT3043428Cajanus cajanPrunus dulcis30.818.0893.8381forward
CNT30468162Cajanus cajanSaccharum spontaneum30.0410.7994.9479forward
CNT30213082Cajanus cajanHelianthus annuus30.0417.5993.6779forward
CNT30126894Cajanus cajanCorymbia citriodora30.0421.8894.9479forward
CNT30355299Cajanus cajanLactuca sativa30.0411.3793.6779forward
CNT30154619Cajanus cajanPrunus persica30.819.9593.8381forward
CNT3024248Cajanus cajanPopulus trichocarpa30.4225.089580forward
CNT30320568Cajanus cajanAsparagus officinalis29.2812.6693.5177forward
CNT30584684Cajanus cajanEchinochloa crusgalli30.0416.5393.6779forward
CNT30175528Cajanus cajanVigna angularis52.4744.2389.86138forward

Expression of CNT30619791

Peptides detected in this lncRNA

>peptide 1 (57 aa)
VRFYLIPLLLLSSNCLGFRSRRRVRFFVRHESQVEEEAYEETEEEAPKDETEIQVYR*

>peptide 2 (37 aa)
MRAKWKKKRMRRLKRKRRKMRQRSKYIVDFFYYQDIS*

Sequence

>CNT30619791
CAGTTAGGTTTTATCTTATTCCCCTGTTACTTCTCAGCAGCAATTGTCTAGGGTTTCGGAGTCGAAGAAGGGTAAGGTTTTTCGTTCGCCATGAGAGCCA
AGTGGAAGAAGAAGCGTATGAGGAGACTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTATATCGTTGATTTTTTTTACTATCAAGATATATC
ATGAGATACAGGCAAACAGCTCCTCGATTTTCATCTATTATCAAAGATTATAATTCCGGTAAA