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Detailed information on CNT30203244


BLAST search results

BLAST vs Swiss-Prot:
sp|O04058|PALY_HELAN, E-value = 1e-61

BLAST vs NONCODE:
NONSTUT002995, E-value = 2e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317648Helianthus annuusCorylus avellana37.1424.6680.42143forward
CNT30727763Helianthus annuusCorchorus capsularis21.5610.3684.3483forward
CNT3070920Helianthus annuusQuercus suber27.7930.8482.24107forward
CNT30162471Helianthus annuusPistacia vera36.8817.0982.39142forward
CNT30636813Helianthus annuusCapsicum annuum409.0485.71154forward
CNT3096229Helianthus annuusSolanum tuberosum40.2613.1782.58155forward
CNT30568715Helianthus annuusActinidia chinensis28.3122.3481.65109forward
CNT30144087Helianthus annuusMedicago truncatula18.4421.1387.3271forward
CNT3023983Helianthus annuusPopulus trichocarpa22.348.3283.7286forward

Expression of CNT30203244

Peptides detected in this lncRNA

>peptide 1 (56 aa)
FSNATLTLSTSLGKMAFNSSSKVAIFWKIEVLAFFSVSPLFSAWSTRTCRSFCING*

>peptide 2 (29 aa)
IFECNSNTLNFLRQNGLQLVFESSNLLED*

Sequence

>CNT30203244
CATTTTCGAATGCAACTCTAACACTCTCAACTTCCTTAGGCAAAATGGCCTTCAACTCGTCTTCGAAAGTAGCAATCTTTTGGAAGATTGAGGTGTTGGC
GTTCTTCTCGGTTTCGCCATTGTTTAGCGCGTGGTCAACGAGGACTTGTCGAAGCTTTTGCATCAATGGGTAGGTGGTGAGGCAAGGGTCGTCAGCGTAG
GACCTTTTTCGCTACTTGGCTCACGGTGTTCTTCACGGTTGACTTCATGTTCTCTTCCAAATGCCTCAAGTCAATCGATTGGCATAACGCGACTAAGTAA
GTCGATGACATGAGCTTTAAAATATCAACCGCTTCCGCGGTTTTCCTTGCGGAAATCAACCCTAGAGAGTTAACATCTTGGTTAT