Detailed information on CNT3096229


BLAST search results

BLAST vs Swiss-Prot:
sp|P26600|PAL5_SOLLC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT002996, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30203244Solanum tuberosumHelianthus annuus13.1740.2682.58155forward

Expression of CNT3096229

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTLASRCPQPQQFSLLRLSLRNSHLGCVAQHFGHG*

>peptide 2 (33 aa)
MINKDLSQLLHQRVGAAAGVISIGKQVFPFHNL*

>peptide 3 (37 aa)
ETYSSLREFKHSLKLTKKDVSSQHIMIVIHHKSKKRI*

>peptide 4 (37 aa)
MSTASAVFLAEIKPKEFTSWLCCSALWTWLVTGFAKN*

>peptide 5 (61 aa)
MVSHWICQELKLRAVRSHRNFSSFETIVQAWIPSCCEIRWQSIVVIVVDKLRELGKHQFPN*

>peptide 6 (44 aa)
MKFTISTHCQSLFGYLAYGVLDSILQVLLQMPQVDSLAKRHEIG*

>peptide 7 (28 aa)
METPIGVPWKLPPCKALFLETSINGLSFT

Sequence

>CNT3096229
GAGACATATTCATCTTTAAGAGAGTTTAAACACTCTCTCAAGTTAACCAAAAAAGATGTAAGTTCACAACATATTATGATAGTAATTCACCATAAGAGTA
AAAAAAGAATCTGAAAAATAGCACTAGACAAGCATTAACAACTGGTCCTTTATCTGGCAAACATTTAGCAGATTGGAAGAGGAGCACCATTCCAGCTCTT
GAGACACTCCAACAATGGATCAATAATCTGTCCATTGCACATTGCTGTGAACACCTTGTCAATCTCCTCACCGGGCGATCGAACTTTTTCACCTGTCAAC
AGTTCTGATCCAAGTTCTTGTCTCACCAACCTGTACAATGGATATGATCTGCATTCTGTTATCCTGTTAGGAATTACAGGGTTGCCACTTTCAAGCATAG
CTCTTGCACTCTCAACTTCTTTAGGCAACACAGCCTTCAATTCGTCCTCGAAAGCTACAATCTTTTGGAAGATTGAGCTGTTCACATTCTTCTCACTTTC
ACCATTCTTCATTGCATGATCAACAAGGACTTGTCTCAGCTTCTGCATCAAAGGGTAGGTGCAGCTGCAGGGGTCATCAGCATAGGTAAACAAGTATTCC
CTTTCCACAACTTGTAGCAATTCCTTTTCACAGAATCTTGCTGGATGAAGTTCACCATTAGCACCCATTGTCAAAGTCTTTTTGGCTACTTGGCTTACGG
TGTTCTTGACAGCATTCTTCAAGTTCTCCTCCAAATGCCTCAAGTCGATAGCCTGGCAAAGCGCCACGAGATAGGTTGATGACATTAGCTTCAAGATGTC
CACAGCCTCAGCAGTTTTCCTTGCTGAGATTAAGCCTAAGGAATTCACATCTTGGTTGTGTTGCTCAGCACTTTGGACATGGTTAGTCACTGGATTTGCC
AAGAATTGAAGCTCCGAGCAGTAAGAAGCCATCGCAATTTCAGCTCCTTTGAAACCATAGTCCAAGCTTGGATTCCTTCCTGCTGTGAGATTAGATGGCA
ATCCATTGTTGTAATAGTCGTTGACAAGCTCCGAGAATTGGGCAAACATCAATTTCCCAATTGATGCAAGGGCCAATCTTGTATTATCCATGGAGACACC
AATAGGGGTTCCTTGGAAGTTGCCACCATGTAAGGCCTTGTTTCTTGAAACATCGATCAATGGATTGTCGTTCACTG