« Back to Capsicum annuum search


Detailed information on CNT30636813


BLAST search results

BLAST vs Swiss-Prot:
sp|P25872|PAL1_TOBAC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT002995, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691552Capsicum annuumOryza sativa11.0921.680.95189forward
CNT30317648Capsicum annuumCorylus avellana11.5633.9783.25197forward
CNT30517474Capsicum annuumJuglans regia12.323587.14210forward
CNT30615983Capsicum annuumSesamum indicum8.5129.8484.83145forward
CNT30727763Capsicum annuumCorchorus capsularis23.5950.1977.61402forward
CNT3069045Capsicum annuumQuercus suber20.7281.1580.74353forward
CNT30710382Capsicum annuumGlycine max7.8120.6883.46133forward
CNT30568715Capsicum annuumActinidia chinensis20.7272.3481.02353forward
CNT30510882Capsicum annuumSolanum lycopersicum22.4899.7492.17383forward
CNT30144087Capsicum annuumMedicago truncatula17.4988.6981.54298forward
CNT30242796Capsicum annuumAvena sativa7.3430.4184125forward
CNT30135526Capsicum annuumLolium perenne10.1520.2682.08173forward
CNT30203244Capsicum annuumHelianthus annuus9.044085.71154forward
CNT3038180Capsicum annuumCucumis melo17.3726.9680.74296forward
CNT30101950Capsicum annuumOryza rufipogon6.8125.4481.9116forward
CNT30113881Capsicum annuumFicus carica16.926.8280.21288forward

Expression of CNT30636813

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSTASAVFLDEIKPKELTSWLCCSALWTWLVTGFAKN*

>peptide 2 (44 aa)
MKFTVSAHCQSSLSYLADCVLDCILQVFFQVPQVYSLAKSHEIG*

>peptide 3 (42 aa)
MELLSCLDIRAAIQNVFHNSSSLNLTRVMLQLVCQMVSEFGLS

>peptide 4 (51 aa)
MVSHWICQELKFRAVRSHRDFSSLETIVQAWIPSCCEIRWQTIVVIVVDKF*

>peptide 5 (46 aa)
METPIGVPWKFPPCKALFLETSINGLSFTELISLSIILVAARMTSI*

Sequence

>CNT30636813
ACCCACAGTTGTTAATACTTGGAATAGAATAAGAAGAGGAACTAGATTGAACAGAAGAGTTGAATAGATATAAGCACACTGTCACTTTTCATCAAGTTTT
TTACTGAAAAGAGACACAAATAGCTACAATCCAACATATTCAAAGAGAGTTTTAATAACCAAAAAAGATATTAGTTCACAACATATTATGATAGTAATTC
ACCATAGGGTAAAAAGAATCTGAAAAATGGCACTAGACAAGCATTAACAGAAGGTTCTTTTTCTGGCAGACACCTAACAGATTGGAAGGGGAGCACCATT
CCAGCTCTTGAGACACTCCAACAATGGATCAATAATCTGTCCGTTGCACATTGCTGTGAACACCTTGTCAATCTCCTCACCAGGTGATCGGACTCTTTCA
CCTGTCAACAGTTCAGTTCCAAGTTCCTTCCTCACAAGTCTGTATAAGGGATATGATCTGCATTCTGTGATCCTGTTGGGAATTGAAGGGTTGCCACTTT
CAAGAGTAATTCTTGCACTCTCAACTTCTTTAGGCAATACGGCCTTCAATTCGTCCTCGAAAGCTGCAATCTTTTGGAAGATTGAGCTGTTCACATTCTT
CTCGCTTTCACCGTTGTTCAGTGCATGATCAACGAGGACTTGTCTCAGCTTCTGCATCAAAGGGTAGGTTGAGCTGCAGGGATCATCAGCATAGGCAAAC
AAGTATTCCCTGTCCACGACTCGAAGCAACTCCTTTTCGCAGAATCTTGCTGGATGAAGTTCACCGTTAGCGCCCATTGTCAAAGTTCTCTTAGCTACTT
GGCTGACTGTGTTCTTGACTGCATTCTTCAAGTTTTCTTCCAAGTGCCTCAAGTCTATAGCTTGGCAAAGAGCCACGAGATAGGTTGATGACATCAGCTT
CAAGATGTCAACCGCCTCGGCTGTTTTCCTTGATGAGATTAAGCCCAAGGAGTTAACATCTTGGTTGTGTTGCTCGGCACTTTGGACATGGTTAGTCACT
GGATTTGCCAAGAATTGAAGTTCCGAGCAGTAAGAAGCCATCGCGATTTCAGCTCCCTTGAAACCATAGTCCAAGCTTGGATTCCTTCCTGCTGTGAGAT
TAGATGGCAAACCATTGTTGTAATAGTCGTTGACAAGTTCTGAGAACTGAGCAAACATCAATTTCCCAATTGATGCAAGGGCCAATCTTGTGTTATCCAT
GGAGACACCAATAGGGCTCCCTTGAAACCATAGTCCAAGCTTGGATTCCTTCCTGCTGTGAGATTAGATGGCAAACCATTGTTGTAATAGTCGTTGACAA
GTTCTGAGAACTGAGCAAACATCAATTTCCCAATTGATGCAAGGGCCAATCTTGTGTTATCCATGGAGACACCAATAGGGGTGCCTTGGAAATTCCCACC
GTGTAAGGCCTTGTTTCTTGAAACATCGATCAATGGATTGTCGTTCACTGAGTTGATCTCCCTCTCGATCATCTTAGTTGCAGCACGAATGACTTCAATT
TGAGGGCCTAGCCATTGTGGAGATGTTCGGAGAGCATAACGATCTTGCTTTGGTTTCTGGAGAGGATCCATTTCATGGAGCTTTTGAGCTGCCTTGACAT
AAGAGCTGCCATCCAAAATGTGTTCCATAATAGCAGCAGCCTCAATCTGACCAGGGTGATGCTTCAACTTGTGTGTCAGATGGTCAGTGAATTCGGGCTT
TCCA