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Detailed information on CNT30568715


BLAST search results

BLAST vs Swiss-Prot:
sp|P45726|PALY_CAMSI, E-value = 6e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533290Actinidia chinensisEucalyptus grandis48.9819.9879.5239forward
CNT30317648Actinidia chinensisCorylus avellana78.2865.8679.84382forward
CNT3069045Actinidia chinensisQuercus suber21.3123.9187.5104forward
CNT30162471Actinidia chinensisPistacia vera48.9828.7683.68239forward
CNT30636813Actinidia chinensisCapsicum annuum72.3420.7281.02353forward
CNT3096043Actinidia chinensisSolanum tuberosum50.224.5283.67245forward
CNT30510882Actinidia chinensisSolanum lycopersicum42.4253.9183.09207forward
CNT30144087Actinidia chinensisMedicago truncatula48.7770.8380.25238forward
CNT30435636Actinidia chinensisAegilops tauschii29.320.7283.22143forward
CNT30242796Actinidia chinensisAvena sativa29.334.7981.82143forward
CNT30203244Actinidia chinensisHelianthus annuus22.3428.3181.65109forward
CNT30620237Actinidia chinensisCajanus cajan31.3517.7984.31153forward
CNT3026176Actinidia chinensisPopulus trichocarpa48.3631.1882.63236forward
CNT3037983Actinidia chinensisCucumis melo29.9220.883.56146forward
CNT30329128Actinidia chinensisDioscorea rotundata30.535.8681.88149forward
CNT30149709Actinidia chinensisBrachypodium distachyon16.3926.678580forward
CNT30592821Actinidia chinensisEragrostis curvula12.528.586.8961forward
CNT30113881Actinidia chinensisFicus carica79.336.0379.84387forward

Expression of CNT30568715

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MVRTRLATWLTVLLTAFFKFSSKCLKSMAWQRATRKVEDMSFSMSIASAVFLDEMRPNEFTSWLCCSALCTWLVTGLARNWSSEQ*

>peptide 2 (34 aa)
QFLHQRVRCAAGVINVCKQVFAVHDSQQVLLRKP*

>peptide 3 (40 aa)
IFASTGTLRCRGHQCMQTSIRGPRLSASPSQKTLKGEVPR*

>peptide 4 (36 aa)
NFCINGYVALQGSSMYANKYSRSTTLSKSFSENLEG*

>peptide 5 (37 aa)
MSSHLGCVARHFARGWSPDWLEIGAQSNKHFHPECVP*

Sequence

>CNT30568715
CAATTTTTGCATCAACGGGTACGTTGCGCTGCAGGGGTCATCAATGTATGCAAACAAGTATTCGCGGTCCACGACTCTCAGCAAGTCCTTCTCAGAAAAC
CTTGAAGGGTGAAGTTCCCCGTTAACGCCCATGGTTAGGACACGTTTGGCTACTTGGCTCACGGTGCTCTTGACCGCGTTCTTCAAGTTCTCCTCCAAAT
GCCTCAAGTCTATGGCTTGGCAAAGGGCTACTAGAAAAGTCGAGGACATGAGCTTTAGTATGTCAATAGCTTCAGCTGTTTTTCTTGATGAGATGAGGCC
TAATGAGTTCACATCTTGGTTGTGTTGCTCGGCACTTTGCACGTGGTTGGTCACCGGATTGGCTAGAAATTGGAGCTCAGAGCAATAAGCACTTCCATCC
AGAATGTGTTCCATAATAGCAGCAGCCTCTATTTGCCCTGGGTGGTGCTTAAGTTTGTGTGTCAAATGGTCCGTAAATTCGGGCTTTC