Detailed information on CNT30201861


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT000879, E-value = 7e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515237Pisum sativumJuglans regia58.4323.5284.33402forward
CNT30632298Pisum sativumVigna unguiculata10058.4585.32688reverse complement
CNT30708286Pisum sativumGlycine max34.1655.2985.53235forward
CNT30283743Pisum sativumTriticum aestivum30.0918.2186.47207reverse complement
CNT30605830Pisum sativumGossypium raimondii19.7722.0888.97136forward
CNT30716815Pisum sativumMalus domestica golden45.3551.484.62312reverse complement
CNT30416518Pisum sativumPapaver somniferum17.5928.6188.43121reverse complement
CNT30723531Pisum sativumLupinus angustifolius99.7128.1186.01686reverse complement

Expression of CNT30201861

Peptides detected in this lncRNA

>peptide 1 (38 aa)
VCIKSTRAIAQLGRAPRLHMRQCFFIGVHHVIKRVDLN*

>peptide 2 (46 aa)
MLGNESRDLKKILFSYYLMNFKVYEVSFPILYFYLIRLIESPFNLS*

Sequence

>CNT30201861
TGTATGTATCAAAAGCACAAGGGCTATAGCTCAGTTAGGTAGAGCACCTCGTTTACACATGCGCCAATGTTTTTTCATAGGAGTCCATCATGTAATTAAA
AGAGTTGATCTTAATTGATAAATCGATGTCTTACTCCAGGAACAAAATACGAGAACAATAGCCTGACAAAGGATTTAGACGTCAAATGGAATCCATAATG
GATTTGAGATATTGATAAGGTGAATACTTAATCTATTCAATGCTAGGCAATGAGTCTAGGGACCTCAAAAAAATTCTCTTTTCTTACTATCTTATGAACT
TTAAGGTGTATGAAGTTTCATTTCCTATTTTATATTTTTATTTAATTAGGTTGATAGAGAGTCCATTTAACTTAAGTTGATCCAGGCTAGAAGCAGACCT
ACGTCAGGATAACCTTCTTCTTTGAAAAACTTTGGTAGTGCTCTTAGATTTTCATCTAAATAAGAAATCAGAGCACAGGGAGTCATTTCCTTTTTCTTTG
TGGAAAGAAAAAAGATGGTAGACTAATTGATATTTCTATCAGTTAATGAAAAAGCCCAATGCAAAAAAAATGCACGTTGGGTCTTTAAAACAATTCAAAT
CATTTTGATAAGAATAGTTTGATCTGTTTTACCGAGAAGGTCTACGGTTCGAGTCCGTATAGCCCTAATATTACTACCGATACTACTC