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Detailed information on CNT30283743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT004695, E-value = 8e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697664Triticum aestivumOryza sativa23.3196.7292.08265reverse complement
CNT30201861Triticum aestivumPisum sativum18.2130.0986.47207reverse complement
CNT3048549Triticum aestivumPrunus dulcis37.7349.7782.52429forward
CNT30177310Triticum aestivumSecale cereale35.893.7899.26407reverse complement
CNT30146591Triticum aestivumMedicago truncatula5.122.3191.3858forward
CNT30243901Triticum aestivumAvena sativa23.9298.5596.69272reverse complement
CNT3017992Triticum aestivumZea mays20.8432.2483.54237forward
CNT30716815Triticum aestivumMalus domestica golden18.0333.7785.85205forward
CNT30340077Triticum aestivumEragrostis tef34.382.9895.13390reverse complement
CNT30416518Triticum aestivumPapaver somniferum10.2927.6686.32117forward
CNT30578014Triticum aestivumOryza barthii8.5327.493.8197reverse complement

Expression of CNT30283743

Peptides detected in this lncRNA

>peptide 1 (34 aa)
NKNKELYFRTMRQNILFSYLLFTLFFLFKVDQFT*

>peptide 2 (32 aa)
MDKIIAVIIGKSRDILFEGGRDSNQGKDPFFY*

Sequence

>CNT30283743
AAATAAAAATAAAGAACTCTATTTCAGAACTATGAGACAGAATATTCTGTTTTCTTATTTACTCTTTACTTTATTTTTTCTATTTAAAGTTGATCAATTT
ACATAATGTATCTATAAACAAAGTAATAAATATACTTAAAACAAAGTAGGAATTCACAAAATGGATAAAATCATTGCAGTTATTATAGGGAAGTCTAGAG
ATATCCTATTTGAAGGAGGACGGGATTCAAATCAGGGAAAGGATCCTTTCTTCTATTGATTTGATAGAAATTCGTTTTTCTTTTCCTGACTGTATGATTT
TGATTTTCGATGAATGAGCCTTTTGTAATGCTTTTATCTCTATTCTATGTCGCAGGCGCCTATCCAGTCTATAAACAAATACTAATGAGAAAATGAAAAC
TATACTAAACTAAAGAAAACATAGGATAGAGATCCTAAAATCTAAAAAAGGGCATATTAGGGCTATACGGATTCGAACCGTAGACCTTCTTGGTAAAACA
GATCAAACGGATTATTATCGAAATGATTTGAACTGTTTCAAAGACCCAACATGCATTTTTTGCATTGGGCTCTTTCATAAACTGATTTAAAGATCAGTTA
GTCCACCATACTTTTTCTTTACGGAAAGATAATGAGATGGCTCCCTGTGCTCTGATTGATTTTTTTTTATTATGATCTATCTAGGAGCAATACCAAAGTG
TTTCAAAGGAGGATTACCTTGACTTAGGTCTGCCTCCGGTCTAAATTAAATCAACCTAAGTGAAATGGAGTCTCTATCGTTCCACTGCAAGAGTTAACTA
TGAGACTTCATACACCTTAAAGTTCATAGAACGAAAAGAAGTTTTTTGGAGGCCCTTATCCTCATTACGCCTAGCATTTAGTGGGCTGGATATTTACCTT
ATCAACTAGCAAATCCATAAGGGTTCTATTTGATTAGGCACCTGAATTGGCACCTGAATCGGACTGAACCGACTGTTTGTCAAGCTACTGTTCTCCTATT
CTCTCGAATCTATGAAGTAAGACATTGATTTTGCAATAAGATCGATTATGTTCATTGCATAATAAGCTCCTTTGAAAAGCATTGGCGCACGTGTAAACGA
GTTGCTCTACCGAACTGAGCTATAGCCCTTGTCAGAG