Detailed information on CNT30708286


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201861Glycine maxPisum sativum55.2934.1685.53235forward
CNT3048549Glycine maxPrunus dulcis53.8826.5785.15229reverse complement
CNT30146591Glycine maxMedicago truncatula54.1288.4684.35230reverse complement
CNT30605830Glycine maxGossypium raimondii22.1215.2692.5594forward
CNT30716772Glycine maxMalus domestica golden24.9412.1783.96106forward
CNT30723531Glycine maxLupinus angustifolius366.2787.58153reverse complement

Expression of CNT30708286

Peptides detected in this lncRNA

>peptide 1 (31 aa)
ITLYLNSQKKMKERDSNIDFVHKFHALNILK*

>peptide 2 (49 aa)
MFFLRGVHLVIKRVYLIVKNRCLILFYGTKQESNSLTKGLAIKSNSSLI*

>peptide 3 (37 aa)
MSANVFFERSSSCNQKSLSYSKKSMSYSILRNKTREQ*

Sequence

>CNT30708286
CATCACTTTGTACTTAAACTCACAAAAAAAGATGAAGGAGAGAGATTCTAATATAGACTTTGTACATAAGTTTCATGCACTAAACATTTTAAAGTGATTT
AAGTCAGTTGGTTAAACATGACGCAATTTTCATCTTGACGAAAAATTATCTACATACTATGATAAAATATGTATCAAAAGCACAAGGGCTATAGCTCAGT
TAGGTAGAGCACCTCGTTTACATGAGCGCCAATGTTTTTTTTGAGAGGAGTTCATCTTGTAATCAAAAGAGTTTATCTTATAGTAAAAAATCGATGTCTT
ATTCTATTTTACGGAACAAAACAAGAGAGCAATAGCCTGACAAAGGGTTTAGCCATAAAATCGAATTCATCATTGATTTGAGATATTGATAAGGTGAATA
CTCATTTCTCGTCAATGTTATGTAT