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Detailed information on CNT3012577


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 5e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589999Zea maysMusa acuminata62.4666.0588.76356forward
CNT30176338Zea maysVigna angularis61.9338.9286.4353forward

Expression of CNT3012577

Peptides detected in this lncRNA

>peptide 1 (60 aa)
TINQQETKTTTIAQTWFILVYNANSSSRLAYAMQRETKDTHASRSINQSTYVHPLRSERQ*

>peptide 2 (33 aa)
MQCNVKQKTHMHLAASINPRTYTLSDPKDNEVA*

>peptide 3 (29 aa)
MWSARPRGSKLPPGYSGSTTSPSGPPAMR*

Sequence

>CNT3012577
CAACAATTAACCAGCAGGAAACAAAAACCACCACTATTGCACAAACATGGTTCATCTTAGTGTACAACGCCAACTCATCATCTCGACTTGCCTATGCAAT
GCAACGTGAAACAAAAGACACACATGCATCTCGCAGCATCAATCAATCCACGTACGTACACCCTCTCCGATCCGAAAGACAATGAAGTTGCATAGCATAG
CCGTTGAGCTTAGTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGTTGACTGGGTCAGCGATGTGGTCAGCGAGGCCGAGGGGGTCGAAG
CTGCCGCCAGGGTACAGCGGGTCGACGACCTCGCCGAGCGGCCCGCCGGCAATGCGGTAGCCCTCGACGGCACCCATGAGCACGACCTGGCAGGCCCAGA
TGGCGAGGATGCTCTGCGCGTGGATCAGGCTGGGGTTGCCGAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTC
GCCGAACTTGACGCCGTTGCGGGAGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAG