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Detailed information on CNT30562275


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 2e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176338Actinidia chinensisVigna angularis47.2544.4381.89403forward

Expression of CNT30562275

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWITSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (47 aa)
MGRSFHRGKVDQQPHLAARQQYGSLQRLPSILLGKPKWQECFGRGSS*

Sequence

>CNT30562275
TAGATCAAAATGAATACTATTCAAGCAGTTAAAACGGAAAATTGACATTTTTTGCATTACTACAATCCAATTTACATCACACACTTTCCAAATTCAAAAC
CCTCCTTTTAATTTCCCCTCACTTTCCGGGGACAAAGTTGGTGGCATAAGCCCAGGCATTGTTGTTAACTGGGTCAGCAAGGTGGCCCAATGGGTCGAAG
CTTCCACCGGGGTAAAGTGGATCAACAACCTCACCTAGCGGCCCGCCAGCAATACGGTAGCCTTCAACGGCTCCCATCAATATTACTTGGCAAGCCCAAA
TGGCAAGAATGCTTTGGGCGTGGATCAAGCTAGGGTTGCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGCGAACCGGCCTTGAACCATACAGCCTC
ACCGAACTTGACACCGTTGCGGGCCAAAAGCTCGGGAAAGACACAACCAAGAGCTCCAAGCATGGCCCATCTGCAGTGGATCACCTCCAGTTCACGGTTC
TTGGCAAAGGTTTCAGGGTCAGCTGAAAGCCCAGCAGTATCCCAACCGTAGTCACCAGGGAATTCTCCGGTCAGGTAGGAGGGGGGATCACCAGATAGTG
GGCCCAAGTATAGAACTCGGTCTTTCCCATACCACGGGCTACCAGATGGCGTAGACTTGGTAGACTTCCTCGCGTTGACTTGGAAGACTCTTCGTGCACC
AACGCTCTCCGAGGTGGAAGGAGAGAGTTTGGTAGCCTTTCCGGCGAAAGAAGGTGAAGAGAGAGACATTGAGGCTGCCATGGTATAAGAGAAAGCTCTT
GGTATTTGTTGGAAATAAGTTTGATGCTTGTGGTTTGATTTTTCATAGATTGT