Detailed information on CNT30235793


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 1e-121

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503719Brassica oleraceaNicotiana attenuata66.3265.0882.03384forward
CNT30543163Brassica oleraceaBrassica napus69.0882.6497400forward
CNT30217700Brassica oleraceaKalanchoe fedtschenkoi57.3442.0884.34332forward
CNT30623083Brassica oleraceaDaucus carota66.6737.0884.46386forward
CNT30176338Brassica oleraceaVigna angularis44.5628.4585.66258forward

Expression of CNT30235793

Peptides detected in this lncRNA

>peptide 1 (33 aa)
RGPMGRSCLLGKASPPLLPMVPLQRLCNPQQLP*

>peptide 2 (29 aa)
MAHLQWITSSSRFLANVSGSADRPAVSQP*

>peptide 3 (43 aa)
SEAQWVEAASWVKQVLRFSQWSLSSDSVTLNSSHEDHLSSPNG*

>peptide 4 (38 aa)
MGCLMGPLAWRRQGRREPLLRQPLERFFFFVDFMVFFL*

Sequence

>CNT30235793
AGCGAGGCCCAATGGGTCGAAGCTGCCTCCTGGGTAAAGCAAGTCCTCCGCTTCTCCCAATGGTCCCTCTCCAGCGACTCTGTAACCCTCAACAGCTCCC
ATGAGGATCACCTGAGTAGCCCAAATGGCTAAGATGCTCTGAGCGTGGACCAAGCTCGGGTTGCCCAAGTAGTCGAGTCCTCCTTCGCTGAAGATCTGTG
AACCAGCCTTGAACCAAACGGCTTCTCCGAACTTGACTCCGTTACGAGCCAAGAGCTCAGGGAAAACGCAGCCTAGGGCTCCGAGCATGGCCCACCTGCA
GTGGATAACTTCTAGCTCACGGTTCCTGGCGAATGTCTCGGGGTCGGCTGATAGACCGGCTGTGTCCCAGCCGTAGTCTCCGGGGAACTCTCCGGTAAGG
TAGCTTGGTGGCTCACCAGAGAATGGACCTAAGTACTTGACTCTTTCGGAACCGTACCATGGGCTGTCTGATGGGCCCTTTGGCTTGGCGACGGCAGGGG
AGGAGAGAGCCATTGTTGAGGCAGCCATTAGAACGTTTCTTCTTTTTTGTTGATTTTATGGTTTTTTTTTTGTGACTGG