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Detailed information on CNT30171637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547627Trifolium pratenseIpomoea triloba26.828.0188.8981reverse complement
CNT30727290Trifolium pratenseCorchorus capsularis40.0739.6785.12121forward
CNT30526745Trifolium pratensePhaseolus vulgaris56.2955.9287.06170forward
CNT30711418Trifolium pratenseGlycine max51.3250.9989.03155forward
CNT3044357Trifolium pratensePrunus dulcis35.7635.5385.19108forward
CNT30232760Trifolium pratenseAnanas comosus27.4818.285.5483forward
CNT30653438Trifolium pratenseRosa chinensis24.1723.789.0473forward
CNT30153271Trifolium pratensePrunus persica24.8324.7590.6775forward
CNT3026785Trifolium pratensePopulus trichocarpa25.1725.0888.1676forward
CNT30724636Trifolium pratenseLupinus angustifolius100.3310083.17303forward

Expression of CNT30171637

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSWVAPTCNPSGGIKVMEHSFGLSGWSGGCTMLACPLQVES*

Sequence

>CNT30171637
GCCGAGTTGGGTAGCACCAACTTGTAACCCAAGTGGGGGCATCAAAGTGATGGAACACAGCTTTGGCTTGTCAGGTTGGTCTGGTGGGTGCACCATGTTG
GCCTGCCCGCTCCAAGTTGAGAGTTGAGTCATGTGATTTAGGCGAAAGCTTAGGTCTCTTGTCTCTTAGACAGGAGGGCACAGCGTGAGGCTGGTTTCAC
AGAGCAGCGAACACCTCCTTCTCCTAACAGTGGAGGGATCACAGGCCGCAGCAATCCCAGTCCAAAAAGCTTGGTGAGCCAAGCCATTGAACCATCATTT
TT