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Detailed information on CNT3026785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618136Populus trichocarpaSesamum indicum27.3914.5989.1683reverse complement
CNT30379440Populus trichocarpaManihot esculenta31.6830.3887.596reverse complement
CNT30507383Populus trichocarpaNicotiana attenuata30.6930.4988.1793forward
CNT30544569Populus trichocarpaBrassica napus22.1122.1991.0467forward
CNT30233957Populus trichocarpaBrassica oleracea22.1122.1989.5567forward
CNT30171637Populus trichocarpaTrifolium pratense25.0825.1788.1676forward
CNT30623923Populus trichocarpaDaucus carota24.0924.0187.6773forward
CNT3050857Populus trichocarpaCucumis sativus23.122.8891.4370forward

Expression of CNT3026785

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MHVRSGSGCLLSDPPVPSQELSQGILVKTWVFWLLEGRAQREAGLTEQRSPPAPGSGRITGRCQLDLHGLKSWSNWTVTF

Sequence

>CNT3026785
GCTGAGCTCGGTAACGCGGGCTTGTAACCTGAGTGGGGGCTTTAAAGTGATGGGACGTGGACTATGCACGTAAGGTCGGGTTCAGGCTGTCTCTTATCTG
ACCCGCCCGTTCCAAGCCAGGAGTTGAGCCAAGGCATCCTAGTGAAGACCTGGGTGTTCTGGCTCCTAGAGGGGAGGGCACAGCGTGAGGCTGGTCTCAC
AGAGCAGCGATCACCTCCCGCTCCTGGCAGTGGAAGGATTACGGGCCGGTGCCAACTGGATCTGCATGGCTTGAAGAGCTGGTCTAATTGGACCGTCACT
TTT