Detailed information on CNT30149185


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670785Brachypodium distachyonSetaria viridis25.4737.787.3795forward
CNT30522989Brachypodium distachyonSetaria italica27.8811.1989.42104forward
CNT30182840Brachypodium distachyonSecale cereale20.1121.4385.3375forward
CNT30222685Brachypodium distachyonHordeum vulgare23.0629.2590.786forward
CNT30720854Brachypodium distachyonTriticum spelta24.1313.2593.3390forward
CNT3036222Brachypodium distachyonCucumis melo22.2522.6883.1383forward
CNT30113854Brachypodium distachyonFicus carica20.3810.7286.8476forward

Expression of CNT30149185

Peptides detected in this lncRNA

>peptide 1 (42 aa)
KRFHHCSIKQQNYRTVEQKPAAPIYHTQHLNYRGFSTKNLLG*

Sequence

>CNT30149185
AAAAGGTTTCACCATTGTAGCATAAAGCAGCAAAATTACAGGACGGTAGAACAAAAACCTGCTGCTCCAATTTACCATACGCAGCACCTGAATTACAGGG
GATTCAGCACCAAAAACCTACTAGGGTAACATGAAAGTTGCAAGTTGCATATTATTAAAAAGAGGTTCGATATCCGAAGATAGGACTCTGAAAACCAAAC
AATACTCATAGGCAGAAGGCCAGACGGATCAGCACCAGAAGGCAGATCAGTACTTGTAGTCCTTGACGTGAAGGCCTGCCTGGCCTTCTCGATGTTCTCC
TCCTTGCCAGCCCAGGCCTTGAGGGTGCTCTGCTGGAGGGCACGCCCAAAGGAGAAGGACAGGAACCACGGCT