Detailed information on CNT30135452


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43210|PALY_WHEAT, E-value = 3e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691482Lolium perenneOryza sativa27.2241.9186.14101forward
CNT30225612Lolium perenneHordeum vulgare26.9549.582100forward
CNT30680825Lolium perenneTriticum urartu87.8764.1785.58326forward
CNT30345244Lolium perenneEragrostis tef44.4766.2783.03165forward
CNT30364646Lolium perenneSorghum bicolor79.5126.8783.73295forward
CNT30321993Lolium perenneAsparagus officinalis35.8532.3683.46133forward
CNT30592720Lolium perenneEragrostis curvula39.0850.5286.9145forward

Expression of CNT30135452

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVPRSGRHGVTLALRSEAMVSRISKRMPE*

>peptide 2 (76 aa)
DRTSARTPRMLASKSTMDANPEPTAVPLTMARPSLGCSSKKPCWMPAILKASAALTLVPSGAVATEFGRPVTRPAM*

Sequence

>CNT30135452
TGACAGAACCTCGGCGAGGACGCCAAGAATGTTAGCCTCGAAGAGCACCATGGATGCCAACCCGGAGCCAACCGCGGTGCCGTTGACCATGGCAAGGCCT
TCCTTGGGCTGCAGCTCGAAGAAACCGTGTTGGATGCCGGCGATTTTGAAAGCCTCTGCTGCGTTAACCTTGGTGCCATCTGGAGCGGTCGCCACGGAAT
TTGGGCGACCGGTCACAAGGCCCGCGATGTAGGACAGCGGGACAAGGTCACCGGATGCCGTGATGGTGCCCCGGAGCGGTAGGCACGGTGTGACGTTGGC
GTTGAGAAGCGAGGCGATGGTCTCAAGGATCTCAAAGCGGATGCCAGAGTAGCCCTGGAGCAGGGTGTTGA